PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_24764 | ||||||||
Common Name | KK1_026237 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | VOZ | ||||||||
Protein Properties | Length: 458aa MW: 50945.7 Da PI: 6.3741 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 435.2 | 8.8e-134 | 193 | 410 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelf 96 pppsaflgpkcalwdc+rp+qg +w+qdycssfha+lalneg+pg+tpvlrp+gi+lkd+llfaalsak+qgk vgipecegaat+kspwna+elf C.cajan_24764 193 PPPSAFLGPKCALWDCPRPVQGLNWCQDYCSSFHASLALNEGPPGMTPVLRPGGIGLKDNLLFAALSAKAQGKVVGIPECEGAATTKSPWNAPELF 288 89********************************************************************************************** PP VOZ 97 dlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvde 192 d+++legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyei+++d +alyrlelklvd+ C.cajan_24764 289 DICVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDVCALYRLELKLVDG 384 ************************************************************************************************ PP VOZ 193 kksakgk.vskdsladlqkklgrlta 217 kks+k+k v+ +s+adlqk++g+l+a C.cajan_24764 385 KKSSKAKlVTGESVADLQKHMGSLSA 410 *******66789***********987 PP |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009408 | Biological Process | response to heat | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009631 | Biological Process | cold acclimation | ||||
GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048578 | Biological Process | positive regulation of long-day photoperiodism, flowering | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 458 aa Download sequence Send to blast |
MKKISKSSCK SASHRLFKDK ARNHVDDLQV MFLDLQFARK ESRTVDAALL EEQVHQMLRE 60 WKAELNEPSP ASSLQQGGSL GSFSTDVYRL LQLCEEEDDA TSPLVAPKPE PNDLTMQVGA 120 KVIVQEGQHQ QDFLLLSECK PSTVGIPNLD GPALEYHQFD FNKNLDHSFY AGTRFCEEDG 180 VPHISSYLPS ACPPPSAFLG PKCALWDCPR PVQGLNWCQD YCSSFHASLA LNEGPPGMTP 240 VLRPGGIGLK DNLLFAALSA KAQGKVVGIP ECEGAATTKS PWNAPELFDI CVLEGETIRE 300 WLFFDKPRRA FESGNRKQRS LPDYSGRGWH ESRKQVMNEF GGLKRSYYMD PQPLNHFEWH 360 LYEYEISKCD VCALYRLELK LVDGKKSSKA KLVTGESVAD LQKHMGSLSA KGSRTKLGIG 420 GGVYSASNRV TLLNAPYQYG LTAPCDYVVD NTSDYYVT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_24764 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015038 | 1e-154 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020230935.1 | 0.0 | transcription factor VOZ1 isoform X1 | ||||
Refseq | XP_020230936.1 | 0.0 | transcription factor VOZ1 isoform X1 | ||||
Swissprot | Q9SGQ0 | 0.0 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A151SAV2 | 0.0 | A0A151SAV2_CAJCA; Uncharacterized protein | ||||
STRING | XP_007148099.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1498 | 34 | 94 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 0.0 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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