PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_24723
Common NameKK1_025089
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GATA
Protein Properties Length: 344aa    MW: 36918.7 Da    PI: 6.3517
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_24723genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA542.3e-17250283134
           GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                    C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  C.cajan_24723 250 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 283
                    99*****************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0169925.9E-753338IPR016679Transcription factor, GATA, plant
PROSITE profilePS5011411.583244280IPR000679Zinc finger, GATA-type
SMARTSM004012.1E-16244294IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.85E-14248307No hitNo description
Gene3DG3DSA:3.30.50.101.2E-14248282IPR013088Zinc finger, NHR/GATA-type
CDDcd002022.90E-13249296No hitNo description
PfamPF003205.3E-15250283IPR000679Zinc finger, GATA-type
PROSITE patternPS003440250275IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MVGPNFMDEI DCGSFFDHID DLLDFPVEDV DAAAATLPPV AAGAGNCNSL ASIWPAQSDS  60
VFSGNSASDL SAELSVPYED IVQLEWLSNF VEDSFCGGSL TMKKVEEPSS CTTKEDSVHN  120
QFNTSSPVSV LESSSTCSGG KTVPPPEIYI PVPCGRARSK RPRPATFNPR PAMNLISPAS  180
SVVGENMQPN VISPKASSDS ENFAESQLVP KIPKQASGEP KKKKKVKLPL PVGPADSNSN  240
QNGSQPVRKC MHCEITKTPQ WRAGPMGPKT LCNACGVRYK SGRLYPEYRP AASPTFCPSL  300
HSNSHKKVLE MRCRGIDKSG YAMNSAASPE LIPNTNSSLT LEYM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1159163KRPRP
2219225PKKKKKV
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_24723
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020229700.20.0GATA transcription factor 8 isoform X1
RefseqXP_020229701.10.0GATA transcription factor 8 isoform X2
TrEMBLA0A151SE250.0A0A151SE25_CAJCA; GATA transcription factor
STRINGXP_007143712.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF48873356
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.16e-40GATA transcription factor 9