PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_23984
Common NameKK1_024787
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 410aa    MW: 46481 Da    PI: 6.5873
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_23984genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44e-19211261256
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  C.cajan_23984 211 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 261
                    59******9.**********955...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.44E-33210270No hitNo description
Gene3DG3DSA:3.30.730.103.3E-32211269IPR001471AP2/ERF domain
PROSITE profilePS5103222.998211268IPR001471AP2/ERF domain
SMARTSM003801.5E-40211274IPR001471AP2/ERF domain
SuperFamilySSF541716.21E-23211269IPR016177DNA-binding domain
PRINTSPR003676.8E-11212223IPR001471AP2/ERF domain
PfamPF008472.3E-12212261IPR001471AP2/ERF domain
PRINTSPR003676.8E-11234250IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MAGANSGKFD VGDETHKASQ QGCGSSESRD WEIEKGKGVD SSSQRRQWKP VFDDASISHN  60
RPLKKIRSPD RHNTNQSYSS SLPFQPSPLS ALPSSSSRIV FPFAFDPSQM QFPHQSPLPN  120
QQQQQQMISF GSQQQHNLPY PPIIARDSSL LHQHLHHHHQ HHHQQQHHQQ QLLQYWSDAL  180
NLSPRGMLAR VGPDGRPLFR PPTQPINTTK LYRGVRQRHW GKWVAEIRLP RNRTRLWLGT  240
FDTAEDAAMA YDREAFKLRG ENARLNFPEL FLNKDKKQEQ EEQESSSLTT GKEQHEPLSD  300
RDVQLPSSNE NDSGIGSSDI TASDEVHAEV TGGSEGISQE LVWGEMSAWF NAIPGPGSPM  360
WDDLDTTNNL LYHSHIPIAN PNQQQSNDAS NDAQRQEHNM GPGYLWKDQD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-21210268160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_23984
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020229396.10.0ethylene-responsive transcription factor ERF053
TrEMBLA0A151SF280.0A0A151SF28_CAJCA; Ethylene-responsive transcription factor ERF053 family
STRINGGLYMA13G37451.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42683258
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.17e-58ERF family protein