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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
C.cajan_21003 |
| Common Name | KK1_021632 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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| Family |
GRAS |
| Protein Properties |
Length: 503aa MW: 56063.4 Da PI: 6.1509 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| C.cajan_21003 | genome | IIPG | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 354.6 | 1.5e-108 | 139 | 503 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98
+ Ll+cA + + +a ++L+r+++ as++g+p+qR+a+yf +AL +++ k +p+++++++s+e + ++k++++++P+ kf+hlta
C.cajan_21003 139 HPLLNCASLA-ETQPDQALEALTRIRKSASQHGTPTQRVAFYFCQALTRKIWA-----QKENKPTAENPTTSEELTLSYKALNDACPYSKFAHLTA 228
7799***955.55888999*********************************9.....7778888888899************************* PP
GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlel 191
NqaIlea+eg++ +Hi+Df+i qG+QW+aLlqa+a+R++g+p +++i g+ + + g +l++tg rL++fA+ l+++fef + + + +++l+
C.cajan_21003 229 NQAILEATEGASNIHIVDFGIVQGIQWAALLQAFATRASGKPnKIKISGIPAIALGphPGPSLSATGYRLSEFAKLLELNFEFAP-ILTPIHQLNH 323
**************************************77776*********888788999************************.799******* PP
GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEr 287
+++++p+EalaVn++lql++llde+ s + + L+l ksl+Pk+v++ e ea++++ F++rf a++y+sa+f+sle +lp++s er vE
C.cajan_21003 324 ASFNIHPNEALAVNFMLQLYNLLDEPPSAVD---TALRLAKSLNPKIVTLGEYEASLTRVGFVNRFKTAFRYFSAVFESLEPNLPADSPERFQVES 416
***********************99999888...************************************************************** PP
GRAS 288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
llgr+i v+ + er+e++e+Wr +e+aGF++v+ls++a +qa+ ll +++ s +++ e+ ++ l Wkd pL++vS+Wr
C.cajan_21003 417 LLLGRRINAVIGPGPVR--ERMEEKEQWRVLMESAGFESVSLSHYAISQARILLWNYSySSLFSLVESTPGFLsLAWKDVPLLTVSSWR 503
*******9999998887..***************************************9999**9999888888**************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 503 aa
Download sequence Send
to blast |
MAYMCADSGN LMAIAQQVIK QKQQQEQQQQ QQQQQQQQQQ QNPLTPLSLH PIPWNNTPPL 60
GYPLPPSDFP DPFQPDPPFH FSTAPFRFSD FDSDDWMDTL IATPAWHTNA DFPSASDLNR 120
LIFPSDHPLH STTASDAAHP LLNCASLAET QPDQALEALT RIRKSASQHG TPTQRVAFYF 180
CQALTRKIWA QKENKPTAEN PTTSEELTLS YKALNDACPY SKFAHLTANQ AILEATEGAS 240
NIHIVDFGIV QGIQWAALLQ AFATRASGKP NKIKISGIPA IALGPHPGPS LSATGYRLSE 300
FAKLLELNFE FAPILTPIHQ LNHASFNIHP NEALAVNFML QLYNLLDEPP SAVDTALRLA 360
KSLNPKIVTL GEYEASLTRV GFVNRFKTAF RYFSAVFESL EPNLPADSPE RFQVESLLLG 420
RRINAVIGPG PVRERMEEKE QWRVLMESAG FESVSLSHYA ISQARILLWN YSYSSLFSLV 480
ESTPGFLSLA WKDVPLLTVS SWR
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development (By similarity). Involved in environmental abiotic stress resistance. May increase the expression of stress-responsive genes (PubMed:20616154). Binds DNA in vitro (By similarity). {ECO:0000250|UniProtKB:Q53K16, ECO:0000250|UniProtKB:Q9SCR0, ECO:0000269|PubMed:20616154}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by drought and high salt stresses, and down-regulated by gibberellic acid (GA) treatment, but not by plant hormone abscisic acid (ABA) application in leaves. Under the salt treatment, expression is induced quickly, and it peaks at 3 hours. Under the drought treatment, the expression is not induced immediately, but reaches its maximum at 3 hours. Under the GA treatment, the expression becomes weaker within 5 hours. {ECO:0000269|PubMed:20616154}. |
