PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_19885 | ||||||||
Common Name | KK1_020472 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | Nin-like | ||||||||
Protein Properties | Length: 261aa MW: 29908.2 Da PI: 6.0512 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 59 | 8.7e-19 | 164 | 212 | 3 | 51 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 ++++l dls yF+ pik+ Ak L+v+++v+K+ CR+ + RWP+Rk+ks C.cajan_19885 164 AKMTLGDLSDYFHIPIKETAKLLEVSTSVVKKVCRKAELYRWPQRKVKS 212 6899*******************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 14.322 | 140 | 233 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 1.4E-17 | 165 | 212 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence Send to blast |
MSLPHWPPSP KPFFCSCCQV LRQIIHTNGS RFDKLEIHGT IGMISHAIIR NTTPGDPSSN 60 YQMVDFCNRN KEEIKSFLKQ YCEQQNIFGY IIMKDPLSAY YDALSTGMDW AQDISDEDDD 120 LISENDVEQD QEPEPEPENE MASNARRLQV IVFVFLGSVA ERVAKMTLGD LSDYFHIPIK 180 ETAKLLEVST SVVKKVCRKA ELYRWPQRKV KSNMRKITVL RRGLANPGTR EKTRVEIQRL 240 QQEMVEYCGG LAPTGIEMLQ V |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_19885 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020204700.1 | 0.0 | uncharacterized protein LOC109790026 isoform X1 | ||||
TrEMBL | A0A151UAE3 | 0.0 | A0A151UAE3_CAJCA; Uncharacterized protein | ||||
STRING | GLYMA20G01991.1 | 2e-84 | (Glycine max) | ||||
STRING | GLYMA20G02005.1 | 2e-84 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7478 | 28 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53040.1 | 2e-09 | RWP-RK domain-containing protein |