PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_19722
Common NameKK1_020303
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 266aa    MW: 29568.1 Da    PI: 8.2264
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_19722genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.2e-18118170255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtae...eAakaaiaarkkleg 55 
                    +++GVr+++ +grW AeIrdp+    r kr++lg+f+tae   +Aa+ ++aa+ kl+g
  C.cajan_19722 118 KFRGVRQRP-WGRWTAEIRDPT----RrKRVWLGTFDTAEgdaGAAAVYDAAAVKLKG 170
                    89*******.**********84....34*************99************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381235.4E-6014266IPR017392AP2/ERF transcription factor ERF/PTI6
SuperFamilySSF541714.71E-19118180IPR016177DNA-binding domain
CDDcd000182.22E-21118180No hitNo description
PfamPF008471.1E-9118165IPR001471AP2/ERF domain
SMARTSM003807.5E-34118184IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-27118179IPR001471AP2/ERF domain
PROSITE profilePS5103220.574118178IPR001471AP2/ERF domain
PRINTSPR003673.9E-9119130IPR001471AP2/ERF domain
PRINTSPR003673.9E-9141157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MSDKHQPLKL HHPFYPPTPS TNFDGDPPCK TAGKPLKLIR VILTDHDATD SDSSADDEDP  60
KEQRKVKRRI THITINLPFL SQTPTPTSKT KLSSFSSLDP TRLARPEKRP GGPRRRNKFR  120
GVRQRPWGRW TAEIRDPTRR KRVWLGTFDT AEGDAGAAAV YDAAAVKLKG PNAVTNFPLS  180
VAEKKFSEAV PPFSGEGFAS PTSVLAYCDD ESTPPFDGFR YGVVDAFGFD IDAPFSLTDV  240
NSGVLSQRSK EEFGEFDPDE FLMWPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-17119181363ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A8e-17119181666ATERF1
3gcc_A8e-17119181666ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_19722
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020215495.11e-168pathogenesis-related genes transcriptional activator PTI6
TrEMBLA0A151UA590.0A0A151UA59_CAJCA; Uncharacterized protein
STRINGGLYMA11G31401.11e-106(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55853252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-16cytokinin response factor 4