PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_19287
Common NameKK1_019845
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 294aa    MW: 34118.7 Da    PI: 8.0662
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_19287genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.4e-054265123
                   EEETTTTEEESSHHHHHHHHHH.T CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirt.H 23
                   y+C+ Cg+ F +++ L++H +  H
  C.cajan_19287 42 YRCKVCGRKFHTNEKLVNHFKQlH 65
                   9******************98766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576676.8E-73868No hitNo description
Gene3DG3DSA:3.30.160.605.2E-44066IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003550.00614265IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.8014270IPR007087Zinc finger, C2H2
PROSITE patternPS0002804465IPR007087Zinc finger, C2H2
CDDcd061671.00E-11116195No hitNo description
PfamPF019362.0E-6116194IPR021139NYN domain, limkain-b1-type
Gene3DG3DSA:3.40.50.10107.9E-6132182IPR029060PIN domain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005739Cellular Componentmitochondrion
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MVAYANSHTF SHVPHCVREQ RKERELLYRL ENKGVIKPNQ PYRCKVCGRK FHTNEKLVNH  60
FKQLHEREHV KRMNQIESAR GSRKVKLVGK YSMKMEKYRK AASDVLTPKV GYGLGDELKR  120
AGFWVQTVLD KPQAADRALR SHMVDIMDHR RVECVVLVSD DTDFVDVIKE AKLRCLKTVV  180
IGDVDDGVLK RTADTAFSWE EVLMGKAKKQ AVSVVKNWKD RDILKRLEWT YNPDVDEKKF  240
NLDDTLTEDD NIEDTCGEVD DDYKDDRCSW WELDSEDDVS NRQPGKSSGL SVNR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_19287
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020211716.10.0uncharacterized protein LOC109796454
TrEMBLA0A151U8N40.0A0A151U8N4_CAJCA; Uncharacterized protein
STRINGGLYMA11G36770.30.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75002533
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12240.11e-123C2H2 family protein