PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_17218
Common NameKK1_017728
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GATA
Protein Properties Length: 56aa    MW: 6133.1 Da    PI: 10.1224
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_17218genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA412.7e-13227934
           GATA  9 TplWRrgpdgnktLCnaCGlyyrkkg 34
                   TplWR+gp  ++ LCnaCG +y++kg
  C.cajan_17218  2 TPLWRNGPADKPVLCNACGSRYKLKG 27
                   9*******77777***********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501149.288127IPR000679Zinc finger, GATA-type
CDDcd002021.14E-9227No hitNo description
SuperFamilySSF577162.66E-8242No hitNo description
PfamPF003206.7E-11228IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.108.9E-11228IPR013088Zinc finger, NHR/GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 56 aa     Download sequence    Send to blast
ATPLWRNGPA DKPVLCNACG SRYKLKGNLD NYLPKNVQLQ PLLKSLKNDP PTGNIS
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_17218
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020221139.12e-23GATA transcription factor 26
TrEMBLA0A151T7W86e-32A0A151T7W8_CAJCA; GATA transcription factor 28 (Fragment)
STRINGGLYMA08G19681.12e-18(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127471024
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.24e-15GATA transcription factor 26