PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_16838
Common NameKK1_017336
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family G2-like
Protein Properties Length: 272aa    MW: 29801.4 Da    PI: 6.0467
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_16838genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like108.24.2e-341973155
        G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                   k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  C.cajan_16838 19 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 73
                   79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.1341676IPR017930Myb domain
SuperFamilySSF466895.55E-181773IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.6E-321874IPR009057Homeodomain-like
TIGRFAMsTIGR015579.3E-261974IPR006447Myb domain, plants
PfamPF002499.9E-102172IPR001005SANT/Myb domain
PfamPF143791.3E-23106152IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MDPGSGGNSL SNNSNLTSKQ RLRWTHELHE RFVDAVAQLG GPDRATPKGV LRVMGVQGLT  60
IYHVKSHLQK YRLAKYLPDS SSDEGKKTDK KETGDMLSNL DASGGMQITE ALKLQMEVQK  120
RLHEQLEVQR QLQLRIEAQG KYLKKIIEEQ QRLSGVLSDA PGSGVTAFVP GDACQEPDDK  180
TDPSTPDPEK AAKDRAPAKS LSIESFSSHH EPMTPDSGCH VDMVLPHQIL ESSLSSYPQP  240
NTVFLGQEQF DPSLGISTRS GEEMEKVGGS NL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A3e-241976158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-241976158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-241976158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-241976158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_16838
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0958120.0BT095812.1 Soybean clone JCVI-FLGm-25I12 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020221202.10.0myb family transcription factor PHL7
RefseqXP_020221203.10.0myb family transcription factor PHL7
RefseqXP_020221204.10.0myb family transcription factor PHL7
SwissprotQ9SJW01e-109PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A151T6Y70.0A0A151T6Y7_CAJCA; Myb family transcription factor APL
STRINGGLYMA09G02040.11e-179(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86103343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.12e-90G2-like family protein