PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_15491
Common NameKK1_015935
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 553aa    MW: 63248.3 Da    PI: 6.622
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_15491genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix90.42e-2872155186
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                    rW++qe+laL+++r++m++ +r+++lk+plWeevs+k++  g++rs+k+Ckek+en+ k+ k++ke+++++   + +t+++fdql+
  C.cajan_15491  72 RWPRQETLALLKIRSDMDSVFRDSSLKGPLWEEVSRKLAGLGYHRSAKKCKEKFENVYKYNKRTKENKSGK--SHGKTYKFFDQLQ 155
                    8*****************************************************************99996..55667******98 PP
2trihelix104.29.8e-33379464187
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                    rW+k ev+aLi++r++++++++++  k+plWe++s++m++ g++rs+k+Ckekwen+nk++kk++e++k+r  e+s+tcpyf++l+a
  C.cajan_15491 379 RWPKAEVHALIRLRTSLDTKYQENGPKAPLWEDISIAMQRLGYNRSAKRCKEKWENINKYFKKVRESNKER-REDSKTCPYFHELDA 464
                    8*********************************************************************8.78999********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.99265129IPR017877Myb-like domain
SMARTSM007170.01169131IPR001005SANT/Myb domain
CDDcd122033.25E-2271136No hitNo description
PfamPF138374.8E-1971157No hitNo description
SMARTSM007170.025376438IPR001005SANT/Myb domain
PfamPF138372.5E-22378465No hitNo description
PROSITE profilePS500907.027378436IPR017877Myb-like domain
CDDcd122034.46E-25378443No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 553 aa     Download sequence    Send to blast
MQLGDTSVLE ISSHNQAEMA VAAAATVPEG DNDNDNDNNN NNNDGDMVGM EVDGSSGEGN  60
NEGNRMSFGG NRWPRQETLA LLKIRSDMDS VFRDSSLKGP LWEEVSRKLA GLGYHRSAKK  120
CKEKFENVYK YNKRTKENKS GKSHGKTYKF FDQLQALEVS NNPPKPQPPL PTTTNTLTLP  180
TRPSDHGNNV ISYVTPFPST NPTLISPSPQ TTTSTTNPRQ PSPPQTNNNN NMPHFLPNMN  240
TPFSTTSTST SSSTASDEDL EERYKRKRKW KDYFRRLTKK VLLKQEEMQK KFLEAMDQRE  300
RERMAQQENW RMQELARVNR EHEILVQERS TASAKDAAVI ALLQKLCTQQ NPSQAEVEPP  360
QHKPTMPQTP TLIICSSSRW PKAEVHALIR LRTSLDTKYQ ENGPKAPLWE DISIAMQRLG  420
YNRSAKRCKE KWENINKYFK KVRESNKERR EDSKTCPYFH ELDALYKEKN KSQNPFGMFQ  480
NMRPNEMMMM EPLMVQPEQQ WRPPPQEGQG KENASEEYQE KEENGDNDDD VDVGDGDSVE  540
AEGESRFEIA TNN
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds specific DNA sequence. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_15491
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150441e-148AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020220849.10.0LOW QUALITY PROTEIN: trihelix transcription factor GT-2-like
SwissprotQ391171e-132TGT2_ARATH; Trihelix transcription factor GT-2
TrEMBLA0A151T3170.0A0A151T317_CAJCA; Uncharacterized protein
STRINGGLYMA16G28240.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37334181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.22e-76Trihelix family protein