PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_14316
Common NameKK1_014744
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GATA
Protein Properties Length: 299aa    MW: 33978.3 Da    PI: 9.794
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_14316genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.44.5e-19160193134
           GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                    C+ C+tt+TplWR gp+g+k+LCnaCG+++rk +
  C.cajan_14316 160 CADCHTTETPLWRTGPNGPKSLCNACGIRQRKAR 193
                    *******************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004014.3E-19154206IPR000679Zinc finger, GATA-type
SuperFamilySSF577166.18E-13155194No hitNo description
PROSITE profilePS5011412.598158190IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.107.9E-16158193IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.72E-11159187No hitNo description
PfamPF003207.3E-17160193IPR000679Zinc finger, GATA-type
PROSITE patternPS003440160185IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MPMDLNDDHT HQLFGTNHQA SSSSSLPYSI LFNQDQDQGG SYHEKSKHLQ SDEEAEKIDP  60
SGGSWDHPIE KNDENRSDLK QRVWKKKDRC ENLQGEDSSR KWMPSKIRMM RKMMVSDIKS  120
VSNSKQIKCE EKNSPLSPQG PDNINYSSSS NHSNITVRVC ADCHTTETPL WRTGPNGPKS  180
LCNACGIRQR KARRAIAAAA SANGTSLVEP DKSQVKKGKK LHKKRMKSKA ECAPQLKKKR  240
KLGDKYRKRF ENYEDLTISL SKNLDLQQVF PQDEKEAAIL LMALSYGLRR DFPSDHYVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1222240KKRMKSKAECAPQLKKKRK
2235241LKKKRKL
3236241KKKRKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_14316
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020224491.10.0GATA transcription factor 21
RefseqXP_020224492.10.0GATA transcription factor 21
RefseqXP_029128640.10.0GATA transcription factor 21
TrEMBLA0A151SWY90.0A0A151SWY9_CAJCA; Putative GATA transcription factor 20
STRINGGLYMA15G18380.11e-138(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19923484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.11e-16cytokinin-responsive gata factor 1