PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_13776

Common Name

KK1_014199

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

VOZ

Protein Properties

Length: 482aa MW: 54058.4 Da PI: 5.169

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_13776	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	428.4	1.1e-131	239	455	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelf 96 pp safl+pkcalwdc+rpa+g+ew+q+ycss+h+ la neglpg+tp+lrp+gi++kdg+lfaa+ ak+qgkevgip+cegaa++kspwna+e+f C.cajan_13776 239 PPASAFLAPKCALWDCFRPAKGVEWCQNYCSSCHELLANNEGLPGMTPILRPGGIGVKDGPLFAAVLAKTQGKEVGIPSCEGAASTKSPWNAPEFF 334 789******************************************************************************************* PP VOZ 97 dlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvde 192 dls+leget+rewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmke+gg+krsyymdpqp+s++ewhlyeyein+ d +alyrlelklvd+ C.cajan_13776 335 DLSFLEGETVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINNHDGCALYRLELKLVDK 430 ******************************************************************************************** PP VOZ 193 kksakgkvskdsladlqkklgrlta 217 kks+kgkv+++sl+dlq+k+g+lta C.cajan_13776 431 KKSPKGKVTRESLTDLQNKMGQLTA 455 *********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence Send to blast
MMRESAKGKC GSSSLQSMKE KEKHLVDKIQ GIFNNIQCAR KESRGNDIVI FEEQMHQLLR 60 EWKAELESPA TSLADGSFDS FTSELAQLLQ VIEEKDDATS PLTKLGPLKT ELPTNNISDN 120 NFQFFQEKHF DDNQPLDHTF EGSGSALFNN AFNNSDMAQL DYHPFSLHQD MNDNPVGHHS 180 DSIGQLDLYQ GLSHNTEMKN SESTQFTLEG FDCSQFFGAD DTVQHGENVI PNILPNICPP 240 ASAFLAPKCA LWDCFRPAKG VEWCQNYCSS CHELLANNEG LPGMTPILRP GGIGVKDGPL 300 FAAVLAKTQG KEVGIPSCEG AASTKSPWNA PEFFDLSFLE GETVREWLFF DKPRRAFESG 360 NRKQRSLPDY SGRGWHESRK QVMKEHGGQK RSYYMDPQPL SYLEWHLYEY EINNHDGCAL 420 YRLELKLVDK KKSPKGKVTR ESLTDLQNKM GQLTAAVVSP DDGQPVKGKT KAEFENDGSP 480 EK

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence Send to blast

MMRESAKGKC GSSSLQSMKE KEKHLVDKIQ GIFNNIQCAR KESRGNDIVI FEEQMHQLLR  60
EWKAELESPA TSLADGSFDS FTSELAQLLQ VIEEKDDATS PLTKLGPLKT ELPTNNISDN  120
NFQFFQEKHF DDNQPLDHTF EGSGSALFNN AFNNSDMAQL DYHPFSLHQD MNDNPVGHHS  180
DSIGQLDLYQ GLSHNTEMKN SESTQFTLEG FDCSQFFGAD DTVQHGENVI PNILPNICPP  240
ASAFLAPKCA LWDCFRPAKG VEWCQNYCSS CHELLANNEG LPGMTPILRP GGIGVKDGPL  300
FAAVLAKTQG KEVGIPSCEG AASTKSPWNA PEFFDLSFLE GETVREWLFF DKPRRAFESG  360
NRKQRSLPDY SGRGWHESRK QVMKEHGGQK RSYYMDPQPL SYLEWHLYEY EINNHDGCAL  420
YRLELKLVDK KKSPKGKVTR ESLTDLQNKM GQLTAAVVSP DDGQPVKGKT KAEFENDGSP  480
EK

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_13776

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015039	0.0	AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020224616.1	0.0	transcription factor VOZ1
Swissprot	Q9SGQ0	1e-153	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A151SVF4	0.0	A0A151SVF4_CAJCA; Uncharacterized protein
STRING	GLYMA06G43890.3	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-156	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]