PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_13456 | ||||||||
Common Name | KK1_013869 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | EIL | ||||||||
Protein Properties | Length: 487aa MW: 54406.3 Da PI: 4.8417 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 188 | 8.4e-58 | 40 | 161 | 1 | 125 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWk 96 eel++rmwkd+++lkrlke++k +++ a++++k ++s++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+g+sd++raWWk C.cajan_13456 40 EELERRMWKDRIKLKRLKEKQKLA--AQQ-AAEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWK 132 8*****************999963..355.599*************************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 97 ekvefdrngpaaiskyqaknlilsgessl 125 ekv+fd+ngpaai+ky+a++l++s+++++ C.cajan_13456 133 EKVKFDKNGPAAITKYEAECLAMSEADNS 161 ***********************998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.5E-56 | 40 | 163 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 487 aa Download sequence Send to blast |
MESVLINGDT LNCSSDIEVD DIRCPNIAEK DVSDEEIEAE ELERRMWKDR IKLKRLKEKQ 60 KLAAQQAAEK QKPRQSSDQA RRKKMSRAQD GILKYMLKLM EVCKARGFVY GIIPEKGKPV 120 SGSSDNIRAW WKEKVKFDKN GPAAITKYEA ECLAMSEADN SRNAKESAIW LGVLSREEAL 180 IRQPSSDNGT SGITGMPPGV PARNKQGATS SDSNYDVDGT DDGIGSVSSK EDRRSQFMDT 240 EPSDNSRRGR NSVQDKRKPT PKKPRLESQD VDKPPAQSDN EILQVEPRSN KFNMNQTEAQ 300 VVGVQIHGNE QSNETNSAAR PLEKELEVTT ARPLHLLAPD FDDYSYLHTN NLIPSESVYM 360 SGRSMHYPEL QNSDMHHETT YLYNPAAGYQ PGQDGQQLQS GNNEQVRPEN DAVSMQAVHM 420 KGDEINGGDL PFFGKDAFQN DLDRPTMDHS FFGSPLSGMS LDFGGLSSPF HLDDFLGDDE 480 MIQYFGA |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_13456 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020223800.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | A0A151SUJ8 | 0.0 | A0A151SUJ8_CAJCA; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
STRING | GLYMA13G41751.1 | 1e-176 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF18205 | 5 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 9e-58 | ETHYLENE-INSENSITIVE3-like 3 |