PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_12589

Common Name

KK1_012977

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Dof

Protein Properties

Length: 334aa MW: 36153.2 Da PI: 8.0989

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_12589	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.9	2.5e-39	62	121	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+s C.cajan_12589 62 ENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSS 121 57899*****************************************************87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	3.0E-25	62	119	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.1E-32	64	120	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.516	66	120	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	68	104	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence Send to blast
MIQELLDGAS ASVIAGERKI SINEGRGLLL TPPTSSSLSS TITIATTTVT ATTTTVTSSS 60 SENQNLRCPR CDSSNTKFCY YNNYNLTQPR HFCKTCRRYW TKGGALRNVP IGGGCRKNKS 120 SAAGMSNSLA AKQTASKMKA VASEFGRSPG FFDQELPQTP ILWGSPQNTQ LMALLRASQN 180 QNQNPNPNPS PMSIAVKEEG NLMGSQSHMM TEPLNGLMNP RTLGYDGVGE FPSLGLCSSF 240 WRNNQDQNQH QNNGFVLGEH QSSGVQELFH KLRSSSSVNY CCSDNSPVFL DNVASSSSLS 300 NILESSSVSA SEFGCWNIPT HSWSDLPTTH GVYP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_12589

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT095824	1e-180	BT095824.1 Soybean clone JCVI-FLGm-19N22 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020217708.1	0.0	dof zinc finger protein DOF4.1
TrEMBL	A0A151TI23	0.0	A0A151TI23_CAJCA; Dof zinc finger protein DOF5.3
STRING	XP_007156842.1	1e-161	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7219	32	47

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	2e-34	DOF zinc finger protein 1