PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_12172
Common NameKK1_012544
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Dof
Protein Properties Length: 262aa    MW: 29452.1 Da    PI: 4.7046
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_12172genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof120.75.1e-382176661
         zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                    +cprC stntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn++s
  C.cajan_12172 21 PNCPRCASTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRS 76
                   68***************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-271273IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.7052175IPR003851Zinc finger, Dof-type
PfamPF027013.7E-322175IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102359IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MEQQQQQQQR SRWKPSVEVA PNCPRCASTN TKFCYYNNYS LSQPRYFCKG CRRYWTKGGS  60
LRNVPVGGGC RKNRRSRHHQ SHRLSANDSA SDDRESSSLG DAHENSNNNH GSRDIDMALV  120
FAKFLNPKPT QDNNNNASSS TSNNYLTPES VETENDAVVD QNKPILSDPA ISENFGGEEL  180
SCLSGIDELE MERFLGVCGD EDGLWSDATI SSWQSHAKEI QFQELELEYS MDDAQLLPFA  240
STMSDTWSSF DLSTMQLFSS TP
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_12172
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ8572744e-82DQ857274.1 Glycine max Dof23 mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020217569.10.0dof zinc finger protein DOF3.5
TrEMBLA0A151TGT00.0A0A151TGT0_CAJCA; Dof zinc finger protein DOF3.5
STRINGGLYMA04G41830.21e-105(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18173394
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.12e-43Dof family protein