PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_09794
Common NameKK1_010075
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family AP2
Protein Properties Length: 469aa    MW: 51300.9 Da    PI: 6.7498
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_09794genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.55.8e-17135184155
            AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  C.cajan_09794 135 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 184
                    78*******************......55************************997 PP
2AP241.63e-13227277155
            AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    s+y+GV+ +k  grW+A+   +     +k+++lg f+++ eAa+a+++a+ k +g
  C.cajan_09794 227 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSELEAARAYDRAAIKCNG 277
                    89********.7******5553..2.26**********99**********99776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541715.1E-16135194IPR016177DNA-binding domain
PfamPF008475.3E-9135184IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.0E-17136193IPR001471AP2/ERF domain
PROSITE profilePS5103217.794136192IPR001471AP2/ERF domain
CDDcd000189.55E-12136194No hitNo description
SMARTSM003805.3E-33136198IPR001471AP2/ERF domain
CDDcd000188.67E-26227287No hitNo description
SuperFamilySSF541717.85E-17227286IPR016177DNA-binding domain
PfamPF008474.1E-9227277IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-15228285IPR001471AP2/ERF domain
PROSITE profilePS5103215.58228285IPR001471AP2/ERF domain
SMARTSM003807.2E-32228291IPR001471AP2/ERF domain
PRINTSPR003675.4E-6229240IPR001471AP2/ERF domain
PRINTSPR003675.4E-6267287IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    Send to blast
MLDLNLNADS ASHTPPLSAA QMESSGSFNS SVVNAADTED SCSFGDAVAY NFAILNTASA  60
VDDAATSAAL HLAGESSLRT IQLFPPAQSG DTPPGWLDFS SMDPHHRGAA APEQRIAPRQ  120
PQVKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAI  180
KFRGVDADIN FNVSDYDEDI KQMSNFTKDE FVHILRRQST GFSRGSSKYR GVTLHKCGRW  240
EARMGQFLGK KYIYLGLFDS ELEAARAYDR AAIKCNGREA VTNFEPSLYE GDMISQSDNE  300
DSKQNLDLNL GIAPPSYTDG QIKNTPNNGS GLKVPHGWDQ IPVDKRVMLE HSGSRSLPVQ  360
PPPGFSMASE RHSSVWSGSN FFPICEETAI EKRMEAGPMP NWAWQVQGPY GGATLTPPFS  420
TAASSGFPST IIPSAADSQI HFPSMTFLHP HFPPSITNSS TVSTFYCGT
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor (By similarity). Involved in spikelet transition. Together with SNB, controls synergistically inflorescence architecture and floral meristem establishment via the regulation of spatio-temporal expression of B- and E-function floral organ identity genes in the lodicules and of spikelet meristem genes. Prevents lemma and palea elongation as well as grain growth (By similarity). {ECO:0000250|UniProtKB:P47927, ECO:0000250|UniProtKB:Q84TB5}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_09794
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150372e-97AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020212425.10.0APETALA2-like protein 3 isoform X2
SwissprotB8AMA91e-106AP22_ORYSI; APETALA2-like protein 2
TrEMBLA0A151TUV50.0A0A151TUV5_CAJCA; Floral homeotic protein APETALA 2
STRINGGLYMA19G36200.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF105813041
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.31e-108related to AP2.7