PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_09547 | ||||||||
Common Name | KK1_009815 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | G2-like | ||||||||
Protein Properties | Length: 60aa MW: 6790.33 Da PI: 9.8816 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 49 | 1.4e-15 | 3 | 37 | 17 | 51 |
G2-like 17 aveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 v++LGG+ekA Pk+ile+mk + L+++hvkSHLQ C.cajan_09547 3 IVKSLGGPEKAKPKAILEMMKSDLLSISHVKSHLQ 37 599******************************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.7E-11 | 3 | 37 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.2E-11 | 4 | 38 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 60 aa Download sequence Send to blast |
MMIVKSLGGP EKAKPKAILE MMKSDLLSIS HVKSHLQVKL FPLINNCFVH SIYFCTLFIV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_09547 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP009661 | 4e-32 | AP009661.1 Lotus japonicus genomic DNA, chromosome 1, clone: LjT38A19, TM0221, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020213085.1 | 6e-17 | protein PHOSPHATE STARVATION RESPONSE 1 isoform X2 | ||||
Refseq | XP_029126802.1 | 5e-17 | transcription factor HRS1 isoform X4 | ||||
TrEMBL | A0A151TU72 | 5e-35 | A0A151TU72_CAJCA; Uncharacterized protein | ||||
STRING | AES81461 | 2e-17 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14490 | 10 | 16 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42660.1 | 2e-10 | G2-like family protein |