PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_08320
Common NameKK1_008566
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 303aa    MW: 33531 Da    PI: 8.7516
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_08320genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.74.6e-21116166256
            AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                    +y+GVr+++ +g+W+AeIrd +     + +r++lg+f+tae Aa+a+++a+++++g+
  C.cajan_08320 116 KYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFDTAEAAARAYDEAALRFRGN 166
                    8********.**********66.....56*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.4E-33115174IPR001471AP2/ERF domain
SMARTSM003801.0E-36116179IPR001471AP2/ERF domain
SuperFamilySSF541715.17E-23116174IPR016177DNA-binding domain
CDDcd000183.78E-23116175No hitNo description
PROSITE profilePS5103225.686116173IPR001471AP2/ERF domain
PfamPF008471.5E-14116165IPR001471AP2/ERF domain
PRINTSPR003676.6E-12117128IPR001471AP2/ERF domain
PRINTSPR003676.6E-12139155IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MQRLLPGLNR EREMSAMVSA LTHVVSGDVP PADHHVVVTP NSVATATSSL KRSRQHHTPF  60
SKISLSHDIK RYIYEINCTG AECSNSSTRE MENAVYEYRT TRRENENVSR EEGRRKYRGV  120
RQRPWGKWAA EIRDPFKAAR VWLGTFDTAE AAARAYDEAA LRFRGNKAKL NFPENVTLRQ  180
QPQPQPQFSI SDSSTSLVSV TTSTDPVVHT TPLIPYQPSS TDYYDCFQLS PFPTNLYQDH  240
MFVTSSMASH LQSSSSSSST SAFASSLTSP QDTSLSSFYT TQLPPWSASA SASASAHSSS  300
SSG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-23115176163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A3e-23115176466ATERF1
3gcc_A3e-23115176466ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_08320
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020212640.11e-162ethylene-responsive transcription factor RAP2-6
TrEMBLA0A151TQR40.0A0A151TQR4_CAJCA; Ethylene-responsive transcription factor ERF114 family
STRINGGLYMA06G15341.14e-88(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49333254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64750.11e-21ERF family protein