PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_08116
Common NameKK1_008360
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family G2-like
Protein Properties Length: 308aa    MW: 34029.1 Da    PI: 7.0954
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_08116genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.18.1e-331972255
        G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                   prlrWtpeLH++Fv+a+++LGG++kAtPk +l+lm+vkgLt++hvkSHLQ+YR+
  C.cajan_08116 19 PRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRS 72
                   8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.4E-311574IPR009057Homeodomain-like
PROSITE profilePS5129410.9711575IPR017930Myb domain
SuperFamilySSF466891.97E-151772IPR009057Homeodomain-like
TIGRFAMsTIGR015572.1E-231972IPR006447Myb domain, plants
PfamPF002491.1E-72071IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MGSCGREGAV RQYIRSKVPR LRWTPELHRC FVHAIDSLGG HHKATPKLVL QLMDVKGLTI  60
SHVKSHLQMY RSMRGDLGRQ GRTPSQHRNQ SFEEHDDGCV DEVNDVGVEY SCSKSMGRES  120
DSFFGHSNLP PKRARFETRS SISESLQCSQ RLCDAVPNPY CLYDYLQPMA EHKGIKELCE  180
ASACQTQPHS SLLPNFPNLT SFKFPNPQSD FLQVTKLNQG MSTSKAINVV VNTETAEEEV  240
GVGGYELSLS LTLPNPSPQR SNASSGSEIS EAISSCHGPG FSNYKDFSTS STLNERINLD  300
LSLALCGN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A2e-202074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-202074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-202074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-202074357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_08116
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0982250.0BT098225.1 Soybean clone JCVI-FLGm-16F9 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213285.10.0myb family transcription factor PHL6
TrEMBLA0A151TQ570.0A0A151TQ57_CAJCA; Putative Myb family transcription factor At1g14600 family
STRINGXP_007142823.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55393353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.12e-35G2-like family protein