PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_07903
Common NameKK1_008135
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 343aa    MW: 37734.7 Da    PI: 8.9273
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_07903genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.42.6e-05228251123
                    EEETTTTEEESSHHHHHHHHHH.T CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                    y+Cp+C+++F ++  +  H ++ H
  C.cajan_07903 228 YTCPKCDTVFYTSQKFAAHVSSnH 251
                    9******************99988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280230251IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0090057Biological Processroot radial pattern formation
GO:0005634Cellular Componentnucleus
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MAPNSPNSNN FNTTLSPPNL TIPNEALVGK GTGQLGLSQR VTEWRKTSLV AKNSRWVHGR  60
VDATEDACLT PTSLEEGHDH DADSIIRASQ MVRAQLMHVA SSSFSNEIVV ETEEKKKAWE  120
MLQAQILRAS ALVPKNEVVG GTSDSTSSLD MVMSTTLTIA PPVQNRFFSQ LEPNTNNMGI  180
IAFCPSPSSA LQRVGEPANE VDNVCENGKA RRYDGRIHSY PYKKNGPYTC PKCDTVFYTS  240
QKFAAHVSSN HYKYETKSER KQRLLAKVRG RNLRLQQVND ALTMVPINAV SARNHNNNNI  300
VVTPSPPRVI KAEVISEFGA EIPPPPGMDK INGVKIKLEP VDT
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_07903
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020233406.10.0uncharacterized protein LOC109813600
TrEMBLA0A151U7Z70.0A0A151U7Z7_CAJCA; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1674277
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18490.12e-22C2H2-like zinc finger protein