PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_06618
Common NameKK1_006806
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family G2-like
Protein Properties Length: 416aa    MW: 46507.7 Da    PI: 4.8523
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_06618genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like108.34.1e-34196250155
        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    k r+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+
  C.cajan_06618 196 KSRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 250
                    68****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.213193253IPR017930Myb domain
SuperFamilySSF466895.55E-18194250IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.5E-32195252IPR009057Homeodomain-like
TIGRFAMsTIGR015577.0E-25196250IPR006447Myb domain, plants
PfamPF002493.7E-10198249IPR001005SANT/Myb domain
PfamPF143795.5E-26281327IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MEAHPTFSIE RSKQLNNMGM SGAFSSSLSV LPIPPEEMYP KLPESQLDFV EQELMTMPLT  60
HSTAPSHYSK ENSASWHADP LPSFLDFPEN GSINNNRVES SACPIIPSEE YCKQNDWQEW  120
AERLISDDEA LTSNWDDLLT DNIQDLEPKV PFQVSKPFSQ FPGNQSQGYQ QPPAASYGEN  180
CTGAALASSA NSAPAKSRMR WTPELHEAFV EAVNQLGGSE RATPKGVLKL MKVEGLTIYH  240
VKSHLQKYRT ARYRPESSEG VMEKKTSSVE DMSSLDLKTG IEITEALRLQ MEVQKRLHEQ  300
LEIQRNLQLR IEEQGRYLQM MFEKQCKPGM ETFKTPSSTI ETPSGVSSNT TRDFTAINET  360
EASQAGHFRS GSDQANRSTT VEEGSLEKGE KPDSPKTLHA IANDDSAQAP KRQRTE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-32195254160Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-32195254160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-32195254160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-32195254160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-32195254160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-32195254160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-32195254160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-32195254160Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as central integrator of phosphate starvation responses (PubMed:20838596). Regulates FER1 expression upon phosphate starvation, linking iron and phosphate homeostasis (PubMed:23788639). {ECO:0000269|PubMed:20838596, ECO:0000269|PubMed:23788639}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_06618
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Not up-regulated by Pi starvation. {ECO:0000269|PubMed:26586833}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020235428.10.0protein PHOSPHATE STARVATION RESPONSE 1 isoform X1
RefseqXP_020235436.10.0protein PHOSPHATE STARVATION RESPONSE 1 isoform X1
RefseqXP_020235443.10.0protein PHOSPHATE STARVATION RESPONSE 1 isoform X1
RefseqXP_020235450.10.0protein PHOSPHATE STARVATION RESPONSE 1 isoform X1
RefseqXP_020235457.10.0protein PHOSPHATE STARVATION RESPONSE 1 isoform X1
RefseqXP_020235463.10.0protein PHOSPHATE STARVATION RESPONSE 1 isoform X1
RefseqXP_020235472.10.0protein PHOSPHATE STARVATION RESPONSE 1 isoform X1
RefseqXP_029125351.10.0protein PHOSPHATE STARVATION RESPONSE 1 isoform X1
RefseqXP_029125353.10.0protein PHOSPHATE STARVATION RESPONSE 1 isoform X1
RefseqXP_029125358.10.0protein PHOSPHATE STARVATION RESPONSE 1 isoform X1
SwissprotQ8GUN57e-86PHL1_ARATH; Protein PHR1-LIKE 1
TrEMBLA0A151U4I00.0A0A151U4I0_CAJCA; Myb family transcription factor APL
STRINGGLYMA13G18805.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15123498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G29000.32e-85G2-like family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Bonnot C, et al.
    A chemical genetic strategy identify the PHOSTIN, a synthetic molecule that triggers phosphate starvation responses in Arabidopsis thaliana.
    New Phytol., 2016. 209(1): p. 161-76
    [PMID:26243630]
  4. Aleksza D,Horváth GV,Sándor G,Szabados L
    Proline Accumulation Is Regulated by Transcription Factors Associated with Phosphate Starvation.
    Plant Physiol., 2017. 175(1): p. 555-567
    [PMID:28765275]