PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_05802 | ||||||||
Common Name | KK1_005947 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | G2-like | ||||||||
Protein Properties | Length: 86aa MW: 10386.3 Da PI: 11.4642 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 92.3 | 4.1e-29 | 19 | 70 | 2 | 53 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 prlrWtp+LH++Fvea+++LGG++kAtPk+il+ m vkgL ++h+kSHLQ Y C.cajan_05802 19 PRLRWTPQLHQHFVEAIQSLGGKHKATPKRILQQMRVKGLRIAHIKSHLQVY 70 8*************************************************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.5E-25 | 16 | 70 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 8.42E-14 | 19 | 73 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 6.5E-23 | 19 | 71 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 2.3E-8 | 20 | 70 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 86 aa Download sequence Send to blast |
MKSSERSSSA RQYKKSQLPR LRWTPQLHQH FVEAIQSLGG KHKATPKRIL QQMRVKGLRI 60 AHIKSHLQVY IYIYRLPYMW SIFIYF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 6e-19 | 20 | 70 | 3 | 53 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 6e-19 | 20 | 70 | 3 | 53 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 6e-19 | 20 | 70 | 3 | 53 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 6e-19 | 20 | 70 | 3 | 53 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_05802 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020229676.1 | 1e-42 | probable transcription factor KAN2 | ||||
Swissprot | Q700D9 | 6e-20 | MYBF_ARATH; Putative Myb family transcription factor At1g14600 | ||||
TrEMBL | A0A151U1Z6 | 3e-55 | A0A151U1Z6_CAJCA; Putative Myb family transcription factor At1g14600 family | ||||
STRING | GLYMA02G45231.1 | 1e-36 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF9186 | 28 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42660.1 | 1e-24 | G2-like family protein |