PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_05773
Common NameKK1_005916
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HB-other
Protein Properties Length: 525aa    MW: 59102.4 Da    PI: 7.2155
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_05773genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.72.3e-191772257
                   T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
       Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                   +kR   t+ ql +Le+++++++yp++e++ eLA++lgLte+q++ WF+ rR k+k+
  C.cajan_05773 17 KKRKLKTPAQLLALEKFYNEKKYPTEEMKSELADELGLTEKQISGWFCHRRLKDKR 72
                   89****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.2E-21372IPR009057Homeodomain-like
PROSITE profilePS5007117.5721373IPR001356Homeobox domain
SMARTSM003895.3E-211577IPR001356Homeobox domain
SuperFamilySSF466892.82E-181581IPR009057Homeodomain-like
CDDcd000866.56E-181774No hitNo description
PfamPF000468.0E-171772IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 525 aa     Download sequence    Send to blast
SSELQSEENK VSNEKNKKRK LKTPAQLLAL EKFYNEKKYP TEEMKSELAD ELGLTEKQIS  60
GWFCHRRLKD KRMMKDEAVA NGRQDRSSGV IQDRGSGLGQ DSCGSSKHAD YRYLDPKEVE  120
SHGLYNHEFS VADMTHGRRS RYPENVSGVD ETSSESSSYL QERLFSQGQD PYDMEHSRHL  180
TPNGALPPLN PKGALNMGYK PSGYLKVKGE IEHAAITAVK KQLGRHYLED GPVLGIEFDT  240
LPPGAFECQT ADPANEPYCV ANPPLPNSPE ISAAKRQPSH SSRYDSYYTK FSSQDSHMEG  300
ADFGSLHESD FQDKQDKKAR QNIKQRQAFY GYTNHFPGRN SFSDLYEDST GEASGYNSTK  360
NHRMSTKQGV EGMRSDSASN HSDHYEEKKV AVKHKELMLH GYDNINPKNI QRSEHVKSKP  420
SGSMRKSRVP VDTEERGLSA RMAKEDMIKG DRKAKNAYRD GDGAGMLSNE IMVAKRAKVD  480
PLQQYHVKQT PLAEMEPRKI QRSGAEMPSS FSEDETAETS SSLDY
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_05773
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150360.0AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020239272.10.0homeobox-DDT domain protein RLT1 isoform X1
TrEMBLA0A151U2400.0A0A151U240_CAJCA; Homeobox protein NANOG (Fragment)
STRINGGLYMA14G03850.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57923051
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03250.17e-85HB-other family protein