PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_04962
Common NameKK1_005084
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 447aa    MW: 47810.8 Da    PI: 6.4572
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_04962genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.5e-10274322355
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  C.cajan_04962 274 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 322
                    58**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.28E-17269339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.83E-11269326No hitNo description
PROSITE profilePS5088815.485271321IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-16272339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.0E-7274322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-10277327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009637Biological Processresponse to blue light
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MGGQENAMGF QHGNKSILTC PTSGLSGANI NVSEMAISSV SMAKPSSDVA NNPFLASSAW  60
DPLVSLSQAQ TFGGSSMVSH TEFANANSSY PLVLENQGIS STSHLVQYMS ESNLGGMVPK  120
VHSYQSGGFS EMVGGASFGQ HGSGDMANTG YPTHYNQIKE AITNGEQSQV EDSIPEDEAP  180
GSAPSGNRRK RGLDHNSTFS PNKNAESDAV RDSPGKTSDG PKEHEKKLKV EQNNGADMRG  240
KQSVKQAKDN NSQSGEAPKD NFIHVRARRG QATNSHSLAE RVRREKISER MRLLQELVPG  300
CNKITGKAVM LDEIINYVQS LQQQVEFLSM KLATVNPELN FDVDRILSKD ILQSRIGHGI  360
GAYGPGINSS HTFPNGSFHG TLAGMPSTSS QFPPLPQNVL DHEFQSFYGI GYDSNAALDN  420
LGPNGNNGQS PISTLVVLFT HSPISSV
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00135DAPTransfer from AT1G10120Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_04962
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150360.0AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020210130.10.0transcription factor bHLH74
TrEMBLA0A151TZT40.0A0A151TZT4_CAJCA; Transcription factor bHLH74
STRINGXP_007160954.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75853345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.12e-78bHLH family protein