PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_04650
Common NameKK1_004770
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 254aa    MW: 28973.1 Da    PI: 9.6321
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_04650genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.0003397119223
                    EETTTTEEESSHHHHHHHHHH.T CS
        zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                    +C+ C+++++++ +L  H +  H
  C.cajan_04650  97 SCSVCSRVYPTSRLLSIHVSEvH 119
                    6*****************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.66994IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002807194IPR007087Zinc finger, C2H2
SMARTSM003552.196119IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028098119IPR007087Zinc finger, C2H2
SMARTSM003550.48134159IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280136159IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MAMEVELNQN QQLGFPFWKP LRRRFRPDSP FFAPGNLERE LLAKQVALEL TEEKQQLEKW  60
MQEEEGREVF CPIVGCGARL TSMEDFEDHY NARHTASCSV CSRVYPTSRL LSIHVSEVHD  120
SFFQAKVARG YDMYECLVES CGLKFKSYNR RQQHLVDKHK FPTSFEFFKK ARPSKKHRLK  180
SQRKKAVCKE DASGMMEVEN AAMDDLVSAV SKLSTSDSTP SSISFGRRPK GLSFVPRAVQ  240
RGGGSNSAAS MSKR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1168179KKARPSKKHRLK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_04650
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0954190.0BT095419.1 Soybean clone JCVI-FLGm-14N2 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020203615.10.0zinc finger protein 511
TrEMBLA0A151TYX40.0A0A151TYX4_CAJCA; Zinc finger protein 511 family
STRINGGLYMA16G06040.11e-176(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97182430
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14140.11e-100zinc ion binding;nucleic acid binding;zinc ion binding