PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_03130

Common Name

Dof26, KK1_003202

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Dof

Protein Properties

Length: 254aa MW: 28811.7 Da PI: 5.9719

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_03130	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	114.8	3.5e-36	14	68	6	60
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +cprC s+ntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvP+Ggg+rk+++ C.cajan_03130 14 PNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTRGGSLRNVPIGGGCRKSRR 68 58**************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-25	10	68	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	3.6E-31	14	68	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.5	14	68	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	16	52	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence Send to blast
MERGWKANNV EVSPNCPRCG SSNTKFCYYN NYSLTQPRYF CKGCRRYWTR GGSLRNVPIG 60 GGCRKSRRGK YSKTSRQVNN SVVHSDDFGR ASSSVVCDGP NIDLAQVYAS FLNNQKPDQE 120 QTDHSYHSPE YSTLLNIDIA LSEELGLSEC LHFHDQSTES HFGESVQMYS CRFNSIQKHQ 180 EYSNSYDTTT NTNFELPPLP GDDMLWSDSE IMVDHALQAT QPPLFGPETH DADFLLANCW 240 THFDLPRDAS FSTP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_03130

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020225347.1	0.0	dof zinc finger protein DOF3.5
TrEMBL	A0A0K8K639	0.0	A0A0K8K639_CAJCA; Dof protein
STRING	GLYMA19G38660.1	1e-134	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1817	33	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	8e-51	Dof family protein

Publications ? help Back to Top
Malviya N, et al. Genome wide in silico characterization of Dof gene families of pigeonpea (Cajanus cajan (L) Millsp.). Mol. Biol. Rep., 2015. 42(2): p. 535-52 [PMID:25344821]