PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_03125 | ||||||||
Common Name | KK1_003197 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | TALE | ||||||||
Protein Properties | Length: 638aa MW: 69411.3 Da PI: 7.0729 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 29.4 | 1.4e-09 | 376 | 413 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + C.cajan_03125 376 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 413 564459******************************88 PP | |||||||
2 | BELL | 120 | 1.1e-38 | 240 | 311 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+ +l+eV++rY+qy++q+++v+ssFe++ag+gsa+ Yt+lAl++iS++FrcLkdaia+q+ C.cajan_03125 240 ERQEIQMKKAKLIGMLDEVEQRYRQYHQQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAIAGQV 311 79*******************************************************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 1.3E-60 | 171 | 309 | IPR006563 | POX domain |
Pfam | PF07526 | 1.9E-47 | 176 | 308 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.195 | 354 | 417 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.36E-12 | 357 | 418 | No hit | No description |
SMART | SM00389 | 5.3E-9 | 357 | 421 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 7.27E-17 | 358 | 424 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 9.0E-29 | 360 | 423 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 2.6E-18 | 374 | 413 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009610 | Biological Process | response to symbiotic fungus | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0010197 | Biological Process | polar nucleus fusion | ||||
GO:0010201 | Biological Process | response to continuous far red light stimulus by the high-irradiance response system | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 638 aa Download sequence Send to blast |
MATYFHGNSE IQSSAADGLQ TLVLMNPGYI HYSDTPSQPQ PSHAAGNLVF LNPAAVAGNN 60 NNSFSPHAPP SQTQQFVGIP LPASQDLNNH SMHAHHDVSP MHGFMPRMQY NHWNALDPAS 120 AARDTSRAQQ GLSLGLGPFR EGQAPAMSGD DLRVSGGSPS SASGVTNNGA SGIQSVLLSS 180 KYLKAAHELL EEVVNVNIGI GSELGKKTKV MGESSAAGSG DGSVAGDGNG KRSSELSTAE 240 RQEIQMKKAK LIGMLDEVEQ RYRQYHQQME IVVSSFEQAA GIGSARTYTA LALQTISKQF 300 RCLKDAIAGQ VRAANKSLGE DDCFGGKIEG SRLKYVDHHL RQQRALQQLG MIQHNAWRPQ 360 RGLPERSVSV LRAWLFEHFL HPYPKDSDKH MLAKQTGLTR SQVSNWFINA RVRLWKPMVE 420 EMYLEEMKEH EQNGSEDKSS KSNEDSVSRP PTSPIGGNVR NQSGFSFMGS SELEGIAQGS 480 PKKARNHEMM HSPNSVPSIN MDVKPNEGSN EQLSMKFGDE RQGRNGSSFM GNQTNFIGGF 540 GQYPIGDIGR FDAEQFTPTP RFTGNGVSLT LGLDSLPGTH QTFLPNQNIQ LGRSLDIGEP 600 HEFGAINTSS PHSTAAYESI SMQNPKRFAA QLLPDFVT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 4e-16 | 363 | 421 | 5 | 63 | Homeobox protein Meis2 |
3k2a_B | 4e-16 | 363 | 421 | 5 | 63 | Homeobox protein Meis2 |
4xrs_A | 3e-16 | 363 | 420 | 1 | 58 | Homeobox protein Meis1 |
4xrs_B | 3e-16 | 363 | 420 | 1 | 58 | Homeobox protein Meis1 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_03125 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015037 | 0.0 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020226137.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_020226138.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Refseq | XP_029129504.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Swissprot | Q9SJ56 | 1e-176 | BLH1_ARATH; BEL1-like homeodomain protein 1 | ||||
TrEMBL | A0A151SQ36 | 0.0 | A0A151SQ36_CAJCA; BEL1-like homeodomain protein 1 | ||||
STRING | XP_007162972.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1627 | 34 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35940.3 | 1e-158 | BEL1-like homeodomain 1 |
Publications ? help Back to Top | |||
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