PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_01934
Common NameKK1_001984
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 456aa    MW: 50433.6 Da    PI: 7.0601
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_01934genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.10.00059360382123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++Cp+C k+F++   L  H r+H
  C.cajan_01934 360 HECPICLKVFPSGQALGGHKRSH 382
                    79*******************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.432936IPR007087Zinc finger, C2H2
SuperFamilySSF576677.14E-6931No hitNo description
PfamPF139121.6E-5931IPR007087Zinc finger, C2H2
SMARTSM003550.15931IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002801131IPR007087Zinc finger, C2H2
SuperFamilySSF576677.14E-690117No hitNo description
SMARTSM003550.1795117IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.82795122IPR007087Zinc finger, C2H2
PfamPF139121.4E-697119IPR007087Zinc finger, C2H2
PROSITE patternPS00028097117IPR007087Zinc finger, C2H2
SuperFamilySSF576671.1E-6267289No hitNo description
PfamPF139121.1E-10267291IPR007087Zinc finger, C2H2
SMARTSM003550.36267289IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.556267294IPR007087Zinc finger, C2H2
PROSITE patternPS000280269289IPR007087Zinc finger, C2H2
SuperFamilySSF576671.1E-6355382No hitNo description
PROSITE profilePS501578.995360382IPR007087Zinc finger, C2H2
PfamPF139122.2E-13360383IPR007087Zinc finger, C2H2
SMARTSM003550.071360382IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280362383IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    Send to blast
MEEDQEVKHV CKFCSKSFPC GRSLGGHMRS HVTNVSTEAE KASSFNNGGG DMGTGSEGGG  60
NNGGGGGGGY GLRENPKKTW RFTDSSEDTL VVLDKLCKEC GKGFHSWKAL FGHMKCHSER  120
VSHNNSSLLE DQDSWNDNHN TNAEHEHKVV LDSHSDNEAT APNRRRRSKR RRTRYLAPST  180
SSVSLVSDAE QEQEEVAMSL MMLSRDVTPW CGLNSGNSLH FESLSKTEGK RVVSYVSEMP  240
KKVTKTREFG NFDEGELSKS NNKRGKFECT TCKKIFHSYQ ALGGHRASHK KIKGCFASRN  300
ESSENSTELE EHLSPDPTTT ESKLLKNEYV EKHEMVTNTI ANGFDNEADT VRESKKVKGH  360
ECPICLKVFP SGQALGGHKR SHHLAGGSES ARNFQSQTVT LEEAAPEIRD FFDLNLPAST  420
EEEGTSHGHG HAESYRPWWL VGSSHKQEAL VGLISN
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_01934
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150351e-164AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020225789.11e-166zinc finger protein ZAT4
RefseqXP_020225790.11e-166zinc finger protein ZAT4
TrEMBLA0A151SLY50.0A0A151SLY5_CAJCA; Zinc finger protein 1
STRINGGorai.003G100400.11e-121(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF11013080
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.12e-29C2H2-like zinc finger protein