PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_01636
Common NameKK1_001674
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 490aa    MW: 54687.7 Da    PI: 8.5291
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_01636genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.000499117321
                    ETTTTEEESSHHHHHHHHH CS
        zf-C2H2   3 CpdCgksFsrksnLkrHir 21 
                    C+ Cgk F+++  L  H++
  C.cajan_01636  99 CKECGKGFRSWKALFGHMK 117
                    ******************7 PP
2zf-C2H210.80.0016406428123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++Cp+C k+F +   L  H r+H
  C.cajan_01636 406 HECPICLKVFASGQALGGHKRSH 428
                    79*****************9999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.2E-5836No hitNo description
SMARTSM003550.0581133IPR015880Zinc finger, C2H2-like
PfamPF139122.4E-51133IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.1381133IPR007087Zinc finger, C2H2
PROSITE patternPS0002801333IPR007087Zinc finger, C2H2
SMARTSM003550.02997119IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.4597124IPR007087Zinc finger, C2H2
SuperFamilySSF576675.47E-598123No hitNo description
PfamPF139121.0E-699121IPR007087Zinc finger, C2H2
PROSITE patternPS00028099119IPR007087Zinc finger, C2H2
SMARTSM003550.14350372IPR015880Zinc finger, C2H2-like
PfamPF139124.8E-11350374IPR007087Zinc finger, C2H2
SuperFamilySSF576673.59E-7350372No hitNo description
PROSITE profilePS501579.868350377IPR007087Zinc finger, C2H2
PROSITE patternPS000280352372IPR007087Zinc finger, C2H2
SuperFamilySSF576673.59E-7401428No hitNo description
PROSITE profilePS501579.245406428IPR007087Zinc finger, C2H2
SMARTSM003550.13406428IPR015880Zinc finger, C2H2-like
PfamPF139121.4E-12406429IPR007087Zinc finger, C2H2
PROSITE patternPS000280408428IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    Send to blast
MEGDQIQEFK HACKFCGKSF PCGRSLGGHM RSHITNLSHE ENEKEKLPTR KLSSSLNKDK  60
DTDSEAAANA AYGLREKPKK TWRISDYSSE EALVYDKFCK ECGKGFRSWK ALFGHMKCHS  120
EKERVSNSLE DQDSWTNANS SHKVVMDSQS DNEGTAPNKR RRSKRRTRYT VAATTSSVVS  180
FANPSSSLSE VEQEQEEVAM SLMMLSRDVS PWSGPHSVAE SSDNNSAYFE ARSSVRTNLV  240
TKFDGKKSFT PNIGKLIKQM NKSGVSNKEY EKGNKSELEY VSALEDSEVE HGRSRVNGTE  300
SVFSKSATTG NKYSSIKTKF LGSELKSSKN WVDKACEAES SKNSNKRGKF ECTTCNKIFH  360
SYQALGGHRA SHKKIKGCFA SRNESSENSI ETDLSPITES KKSKGHECPI CLKVFASGQA  420
LGGHKRSHMT GVSESRSFQI QEPVQEIRDF LDLNLPAATE EESNSHADSN RPWWIVEDNH  480
KQEALVGMIS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157164NKRRRSKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_01636
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020225809.10.0uncharacterized protein LOC109807649
RefseqXP_020225810.10.0uncharacterized protein LOC109807649
RefseqXP_020225811.10.0uncharacterized protein LOC109807649
RefseqXP_029129015.10.0uncharacterized protein LOC109807649
TrEMBLA0A151SL380.0A0A151SL38_CAJCA; Zinc finger protein 1
STRINGXP_007155253.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF11013080
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.16e-59C2H2-like zinc finger protein