PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa26370s010.1
Organism
Camelina sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family NAC
Protein Properties Length: 79aa    MW: 8914.95 Da    PI: 8.4455
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa26370s010.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM22.33.6e-074465122
             NAM  1 lppGfrFhPtdeelvveyLkkk 22
                    lppGf+F P+deel  +yLk  
  Csa26370s010.1 44 LPPGFKFTPSDEELCIDYLKSF 65
                    79*****************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.35E-73872IPR003441NAC domain
PROSITE profilePS5100510.8644479IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    Send to blast
MSMPSRNKRK ERSTPEPQTQ PPSEIASSSS SSSSSAAHNL PYLLPPGFKF TPSDEELCID  60
YLKSFSPDRK YYYPPFNIP
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa26370s010.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010424216.12e-47PREDICTED: NAC transcription factor 29-like
RefseqXP_010424224.12e-47PREDICTED: NAC transcription factor 29-like
TrEMBLD7MI614e-15D7MI61_ARALL; Uncharacterized protein
STRINGXP_010424216.19e-47(Camelina sativa)
STRINGXP_010424224.19e-47(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2320623
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56560.13e-15NAC domain containing protein 65