PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Csa07g061590.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family | NAC | ||||||||
Protein Properties | Length: 99aa MW: 11548.3 Da PI: 5.1779 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 24.8 | 6.2e-08 | 21 | 78 | 78 | 128 |
NAM 78 tksgyWkatgkdkevlsk.kgelvglkktLvfy......kgrapkgektdWvmheyrl 128 + gyW+ d + s +ge++g kk++ fy r+ + k +W+++eyrl Csa07g061590.1 21 CDGGYWRIMHPDVMINSMpSGETIGFKKVFKFYetekqrYVREGEEIKVTWFIDEYRL 78 468*********9999988999***********555432245666679********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 14.843 | 1 | 94 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.66E-14 | 6 | 91 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.6E-4 | 18 | 78 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 99 aa Download sequence Send to blast |
MFLNFGTCIF ANQTCGDTEK CDGGYWRIMH PDVMINSMPS GETIGFKKVF KFYETEKQRY 60 VREGEEIKVT WFIDEYRLVE KEMQNKVLSV ISIITKDN* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Csa07g061590.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010419423.2 | 4e-66 | PREDICTED: uncharacterized protein LOC104705138 | ||||
TrEMBL | R0GIC3 | 4e-37 | R0GIC3_9BRAS; Uncharacterized protein | ||||
STRING | XP_010513366.1 | 4e-56 | (Camelina sativa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G60300.1 | 3e-35 | NAC family protein |