PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Csa02g062650.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
Family G2-like
Protein Properties Length: 155aa    MW: 17063.3 Da    PI: 10.1341
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Csa02g062650.1genomeCSGPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like26.41.5e-081203655
         G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                    m+v+gLt+e+v+SHL kYRl
  Csa02g062650.1  1 MNVDGLTRENVASHLHKYRL 20
                    9******************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.3E-7121IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MNVDGLTREN VASHLHKYRL IHNLKRETNK LNMGQLDGLI NINATSSALL SINLEKMNLS  60
SFIQQGHHQN SSNSANPSGA YHSTTQSPPR VQNVNQYQPS SSPLKPLLFP MINFSANMGD  120
SKGIKEPAIV CKFPNIPKEN KTGPSVYRKL HDSD*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapCsa02g062650.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010453160.12e-33PREDICTED: two-component response regulator ARR18-like
RefseqXP_010453169.12e-33PREDICTED: two-component response regulator ARR18-like
SwissprotQ9FGT72e-32ARR18_ARATH; Two-component response regulator ARR18
TrEMBLR0EV999e-32R0EV99_9BRAS; Two-component response regulator
TrEMBLR0EW397e-32R0EW39_9BRAS; Two-component response regulator
TrEMBLR0GL809e-32R0GL80_9BRAS; Two-component response regulator
STRINGXP_010485212.12e-71(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2319824
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58080.11e-29response regulator 18