PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_012573579.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 213aa MW: 24310.8 Da PI: 6.9162 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.7 | 1.4e-14 | 104 | 163 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++ +r+ +NRe+ArrsR+RKk++ie L+ v+ L++ N++L +++ l + ++ +++ XP_012573579.1 104 DRKKKRMFSNRESARRSRLRKKQQIEVLQYHVDHLQSLNHQLSQKVIYLLECNQQIHQQN 163 7899**************************************999766655555555544 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.7E-13 | 101 | 165 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.231 | 103 | 166 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.38E-11 | 105 | 156 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.3E-12 | 105 | 162 | No hit | No description |
Pfam | PF00170 | 3.4E-12 | 105 | 163 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 5.01E-13 | 106 | 154 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 108 | 123 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 213 aa Download sequence Send to blast |
MECNDDEHHE APYASLTQYL PYPSPTQKPI MTSNLQNMEN GEGHYLTHLN QSQALNDIPF 60 YYSQLHLSSN TSNSAIQIPL QKSSPNTSSN SNNNNAGEAK VLDDRKKKRM FSNRESARRS 120 RLRKKQQIEV LQYHVDHLQS LNHQLSQKVI YLLECNQQIH QQNAQLKDKV SSLQVALSDS 180 MVTTGNADIP HHNPNDFPTD PSTRPVETSR DFE |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 117 | 123 | RRSRLRK |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | XP_012573579.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_027192752.1 | 1e-157 | basic leucine zipper 43 | ||||
TrEMBL | A0A3Q7YDZ6 | 1e-156 | A0A3Q7YDZ6_CICAR; basic leucine zipper 43 | ||||
STRING | XP_004508736.1 | 1e-152 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13044 | 24 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G60830.1 | 9e-29 | basic leucine-zipper 70 |