PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012572666.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 473aa    MW: 52262.1 Da    PI: 5.7994
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012572666.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.43.9e-30259317259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK  kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+H+h+
  XP_012572666.1 259 SDGCQWRKYGQKLAKGNPCPRAYYRCTMAiGCPVRKQVQRCAEDRTILVTTYEGNHTHP 317
                     7*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.0E-32243319IPR003657WRKY domain
SuperFamilySSF1182903.14E-27250319IPR003657WRKY domain
PROSITE profilePS5081128.552253319IPR003657WRKY domain
SMARTSM007742.9E-35258318IPR003657WRKY domain
PfamPF031063.0E-26260317IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    Send to blast
HDNRPIINEL DFFPHNNNNH HSASTSAPPS FNNIRHYTNP PLLGLRVNTG LNLLTTNTSN  60
HDQFMVDDDI STDSKDERVK LEFGVLQAEL EKLKEENYKL RNMLDEVKRN YDTLQMHFAS  120
LMQVRKVEDC NQEQDQVFEK KQNENVEVLV PRQFMDLELA TTNCDDETSL SPCVGRSQIE  180
SKSIANNIEE GSKEFDHDKN ESHSGIERMD SPPKEQVLAA INNNNVPRFS PTTNVEQAEA  240
TMRKTRVSVR TRSEAAQISD GCQWRKYGQK LAKGNPCPRA YYRCTMAIGC PVRKQVQRCA  300
EDRTILVTTY EGNHTHPLPP AAMAMSNTTS AAATMLLSGS MSSAEGLMNA NFLARTMLPC  360
SSSMATISAS APFPTVTLDL TQPPNPSNQF QFPFLQNFPN STTSLLPQIT ADPNFTAALA  420
AAITSIIGAS LPNINNNNVS ITANNNSNEN ATSSNNSNGN NNMNNPNSSG KTS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-22245321176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012572666.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012572666.20.0probable WRKY transcription factor 31 isoform X1
SwissprotQ9XEC31e-107WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A1S3ECJ20.0A0A1S3ECJ2_CICAR; probable WRKY transcription factor 31 isoform X1
STRINGXP_004487422.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86634121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22070.19e-87WRKY DNA-binding protein 31