PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_012571061.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
||||||||
Family | EIL | ||||||||
Protein Properties | Length: 808aa MW: 90777.3 Da PI: 7.276 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 384.7 | 1.4e-117 | 40 | 395 | 1 | 341 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 eel+ r w+d+ ll++lke+++q+ +nks e ++k+msraQDgiL+YMlk+m vc ++Gf+Ygiipe+gkp +g+sd+Lr+WW XP_012571061.1 40 EELETRIWRDRLLLRKLKEERRQK-----------DKNKSLEYLKKKTMSRAQDGILRYMLKMMDVCDIRGFIYGIIPETGKPTSGSSDNLRGWW 123 8**************999999982...........3468999***************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS EIN3 96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190 ke v+fdrngpaai+ky+ + i++ ++ + +s + sl+el+DTtlgSLLs+lmqhcdppqrrfplekg+ pPWWPtGke ww+e+g+skd XP_012571061.1 124 KERVKFDRNGPAAIAKYEEESGISEINELN--GESIAPCSLQELPDTTLGSLLSSLMQHCDPPQRRFPLEKGIFPPWWPTGKEPWWNEMGFSKDP 216 ***********************8876666..589************************************************************ PP -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX.XXXXXXXXXXXXXXXXX CS EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss.slrkqspkvtlsceqke 282 g+ppykkphdlkkawk+ Ltavikhmsp+ie+i++ +rqs++lqdk ++ke++++++v+n+ee+++++++++ +s s++ + + +l + +++ XP_012571061.1 217 GPPPYKKPHDLKKAWKICALTAVIKHMSPNIEKIKHIVRQSRSLQDKLTSKETAIWSAVMNHEESLAREMYPDlfPSfSSSVGGSSCFLLEPNDY 311 *************************************************************************9644444446667777777799 PP XXXXXXXXX.XXXXXXXXXX.........................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXX CS EIN3 283 dvegkkeskikhvqavktta.........................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetel 341 d e++++s ++ +++ +t+ + + +++rk + +k+ s + c + ++ ++ + XP_012571061.1 312 DIEVQHDSDVEGDESKLETMlpqpqlqlqsqllqlqlpssssslwSSDDIDERKVDGQFVEKTGSFHQAFKCLNVDCKVHDLGN 395 999988888665555444447777777888888888888888887555566666555555555555556666666666655555 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 3.6E-110 | 40 | 280 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.8E-64 | 158 | 289 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 8.76E-55 | 161 | 283 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 808 aa Download sequence Send to blast |
MNRRVYNGAP TYPSMGETSN RAKQEKGKEV AVEEKYISIE ELETRIWRDR LLLRKLKEER 60 RQKDKNKSLE YLKKKTMSRA QDGILRYMLK MMDVCDIRGF IYGIIPETGK PTSGSSDNLR 120 GWWKERVKFD RNGPAAIAKY EEESGISEIN ELNGESIAPC SLQELPDTTL GSLLSSLMQH 180 CDPPQRRFPL EKGIFPPWWP TGKEPWWNEM GFSKDPGPPP YKKPHDLKKA WKICALTAVI 240 KHMSPNIEKI KHIVRQSRSL QDKLTSKETA IWSAVMNHEE SLAREMYPDL FPSFSSSVGG 300 SSCFLLEPND YDIEVQHDSD VEGDESKLET MLPQPQLQLQ SQLLQLQLPS SSSSLWSSDD 360 IDERKVDGQF VEKTGSFHQA FKCLNVDCKV HDLGNAFVGG GQQNQVDAQA QVQVQPHFNN 420 SNVSSMNNLV MMPPSNENGA HKRKACELVE NSITSLPSYH EGYNCNNPQY QCHNQGGSVN 480 LSSLPSSNVS VMQPNEVANK RKCELARNVT TNNNELYSYF NPHCEDHGFQ QNRNVVRNHQ 540 FTSTHSESSN NNHLQMVGVG SSKSHQFVNQ QHVQAAPLEQ HVQAAVPPVT NQINHHAGGG 600 GGNEVVSDLM AIYKSGIQLK KNTTMNVVPT NNMIPNPGVN PNNLQPQIYN AGGVQQKRNN 660 NTMSTTLPAG NMMIPASGFN QNIQQPQIYN TTSTVQQRKN STMMNMIPTL GFNQNNNQLQ 720 MDKNFYGNNN HHQSVGVGNG YYNNSAEVGT NIVPPMHGNV STTSFDHLRG FNSQSNVEAY 780 NNNAFIDSPN VATPSNYYDY NWFYNKGN |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 3e-64 | 159 | 289 | 3 | 133 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 3e-64 | 159 | 289 | 3 | 133 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | XP_012571061.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_012571061.1 | 0.0 | putative uncharacterized protein DDB_G0282133 | ||||
TrEMBL | A0A1S3E7T8 | 0.0 | A0A1S3E7T8_CICAR; Uncharacterized protein | ||||
STRING | XP_004499747.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G20770.1 | 1e-109 | EIL family protein |