PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012569114.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 763aa    MW: 84580.5 Da    PI: 6.4686
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012569114.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.52.4e-32273329259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers  d++++ei+Y+g+Hnh 
  XP_012569114.1 273 EDGYNWRKYGQKQVKGSEYPRSYYKCTQTNCQVKKKVERSL-DGQITEIIYKGTHNHA 329
                     7****************************************.***************7 PP
2WRKY101.64.5e-32485543159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver++++ k+v++tYeg+Hnh 
  XP_012569114.1 485 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHNLKYVITTYEGKHNHA 543
                     59********************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.5E-28259331IPR003657WRKY domain
PROSITE profilePS5081123.25267331IPR003657WRKY domain
SuperFamilySSF1182904.84E-25270331IPR003657WRKY domain
SMARTSM007742.9E-35272330IPR003657WRKY domain
PfamPF031067.4E-25273328IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.7E-35470545IPR003657WRKY domain
SuperFamilySSF1182901.01E-27478545IPR003657WRKY domain
PROSITE profilePS5081137.195480545IPR003657WRKY domain
SMARTSM007741.3E-36485544IPR003657WRKY domain
PfamPF031061.2E-24486542IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 763 aa     Download sequence    Send to blast
MEENNNINEK KNGVDGNNVS DTKGGDFFDF SPKRSIAERR GFNSNAARIN TALFRVAMNP  60
LTSPSARSPQ LTIPSGISPT ALLDSPIMLP NSQAMPSPTT GSFMMLPPLT NEGSMLTSVT  120
LEQRNMDVPT ASDIASSFKF NIQPNLDPNS LPPYSASLNQ VSSNFHKVKG AHRDNQMLLQ  180
DQLRLDFSFP EDLSYDYFAK INGVHFYNDV KMVDDMIADT NNVEIPISRS EEASDESSLP  240
ENSIHSEDVG RQVVLEAEQK ETSHATGVVR TSEDGYNWRK YGQKQVKGSE YPRSYYKCTQ  300
TNCQVKKKVE RSLDGQITEI IYKGTHNHAK PTSSRRASVP SNDEMSEIAE ANETCNRVDA  360
DSVWRNIQPQ VKDTKHNYLD WKPDGQERTS STSVVTEVSD PRSRKRARSR YMFETDDTLE  420
LSSTHGNHDG DKDGASQAVL ALEEDAESES KRRKKESCPV ETAVPSRAVR EPRVVVQIES  480
EVDILDDGYR WRKYGQKVVK GNPNPRSYYK CTSAGCSVRK HVERASHNLK YVITTYEGKH  540
NHAVPTARNN NNNNNNSNSN NNDNNQINSS DGGLPPSGAN AQMASFPKSE AHELLATNFD  600
RKPPDFSNEF LRSSLIGSFS NDMKFGPSSI SQMKYATLNN TIPYCNYGMN PDRGAARQAG  660
PMMFPDFPVP LQLNLPSAGN YSLAGINFNQ VKPMSSSVQS FLSGQQGKDI DPGFLRPKQE  720
LKDESLYNAC APSLDRASPT LTPPSSASAS PSIYQSIMQN FPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-31262545277Probable WRKY transcription factor 4
2lex_A3e-31262545277Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012569114.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027188215.10.0LOW QUALITY PROTEIN: probable WRKY transcription factor 2
TrEMBLA0A3Q7YDD40.0A0A3Q7YDD4_CICAR; LOW QUALITY PROTEIN: probable WRKY transcription factor 2
STRINGAES803920.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83493445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.15e-98WRKY DNA-binding protein 2