PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012568841.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 189aa    MW: 21948.3 Da    PI: 6.3932
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012568841.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.91.2e-1484130551
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                     ++ rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L ++l++
  XP_012568841.1  84 RKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLLDKLNS 130
                     578***************************************99886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-1280144IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.28982145IPR004827Basic-leucine zipper domain
PfamPF001701.3E-1284131IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.0E-1284156No hitNo description
SuperFamilySSF579592.39E-1384133No hitNo description
CDDcd147021.01E-1885130No hitNo description
PROSITE patternPS00036087102IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MQAKETTSLN YLHPSSDPSP YPYQNNIIQN TIPTSQLLKF SNNFHSFQNF PQTLHQDFSP  60
QSSCISNNST SDEADEQQGL INERKHRRMI SNRESARRSR MRKQKHLDEL WSQVVWLRNE  120
NHQLLDKLNS FFESHDRVVQ ENVQLKEEAS ELRQMVCDIK LNSSCLPLSP LEDVPSITSP  180
FVKSDDSSN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196103RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012568841.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012568841.11e-137basic leucine zipper 43-like
SwissprotQ9FMC22e-40BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A1S3E1861e-135A0A1S3E186_CICAR; basic leucine zipper 43-like
STRINGGLYMA18G51250.12e-75(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.16e-51basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]