PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012568707.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family SAP
Protein Properties Length: 481aa    MW: 52638.3 Da    PI: 6.7879
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012568707.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP698.48.3e-21324812455
             SAP   2 ssssssssses...eegseggeggdass.............gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvc 80 
                     ss+ssssss+s    ++s+ +++ +  +             + +e+psssrqra+nevwp P++e+latqvaid+s ++G l+aasal ++fqvc
  XP_012568707.1   2 SSTSSSSSSSSpqlASSSNVDNNNN--NnnnnnnilggpsnEIFEAPSSSRQRAINEVWPAPVVESLATQVAIDSSLFHGPLSAASALSIIFQVC 94 
                     5555444443311133333333333..2357889999999999**************************************************** PP

             SAP  81 stwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlf 175
                     stwr+vsrs+llw++ltrriWrrt++lrdtW+ eyiy+hrtarnf+t+++++v++q+dp     d++ ++l+Crcl+lsd++la+Gf+dG+vrlf
  XP_012568707.1  95 STWREVSRSNLLWEELTRRIWRRTYQLRDTWHLEYIYWHRTARNFSTGTHALVVPQYDPG----DHH-QTLICRCLTLSDTHLACGFVDGTVRLF 184
                     ***********************************************************6....445.89************************* PP

             SAP 176 dletrlhvstflpqhrdrlGrfsravsGivisd..srlvfatldGdihvavidgag......aaaarrallGdvvndGalvdfaGsgrWwvGlya 262
                     dl t +hv+tf+++h++++G+fs++vsGivi++  s+l+fa+ldGd++va+++g+        + arra+lGdvvn+G+lv+faG+  WwvGl+a
  XP_012568707.1 185 DLITGAHVTTFWSTHGHLFGPFSQSVSGIVIANenSTLAFARLDGDVYVAILNGPVlgpgpgPILARRAILGDVVNNGVLVEFAGCRLWWVGLFA 279
                     *******************************752278****************976666666999****************************** PP

             SAP 263 GvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneay 357
                     G++G af+iW+a+te++vf+GGsltdPe+v+GWhmltel+e vGrvrvte e++vaCts+rlv+f+lrn++v++r++ +++G++v+sld+s+e++
  XP_012568707.1 280 GHAGGAFQIWNAQTEQRVFIGGSLTDPETVQGWHMLTELVEPVGRVRVTEGEFVVACTSSRLVSFNLRNPEVLIRDVGSTTGFVVGSLDVSHEVF 374
                     *********************************************************************************************** PP

             SAP 358 vvvdsrGvatvrrvenleevcrfrvrg.aqrgvlgCvnggyalvyagg..vlrvWeiekkeg.ylyslrervg.....evnalvaddrhvavsss 443
                     v+v+++Gv+tvrrv ++e+v+rfr+r+ + rg+lgC+n+gy+++y+g+  +lrvW+i++ ++ +++++ +  +     ++n++va+ +hva+ss+
  XP_012568707.1 375 VIVERNGVGTVRRVCTFERVSRFRLRSsWLRGLLGCMNLGYVITYSGSagLLRVWDIHEPAArLCVTVGVTDEghvhaNANSMVANRTHVAISSN 469
                     ***************************9******************9877*********988799999998777888899*************** PP

             SAP 444 dgtihlldfgaq 455
                     d++ihlldf++q
  XP_012568707.1 470 DSSIHLLDFSVQ 481
                     **********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.1280.502.0E-488145No hitNo description
SuperFamilySSF813831.1E-690134IPR001810F-box domain
Gene3DG3DSA:2.130.10.101.4E-9153258IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509787.32E-12162238IPR017986WD40-repeat-containing domain
SuperFamilySSF509787.32E-12294478IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.101.4E-9305478IPR015943WD40/YVTN repeat-like-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 481 aa     Download sequence    Send to blast
MSSTSSSSSS SSPQLASSSN VDNNNNNNNN NNNILGGPSN EIFEAPSSSR QRAINEVWPA  60
PVVESLATQV AIDSSLFHGP LSAASALSII FQVCSTWREV SRSNLLWEEL TRRIWRRTYQ  120
LRDTWHLEYI YWHRTARNFS TGTHALVVPQ YDPGDHHQTL ICRCLTLSDT HLACGFVDGT  180
VRLFDLITGA HVTTFWSTHG HLFGPFSQSV SGIVIANENS TLAFARLDGD VYVAILNGPV  240
LGPGPGPILA RRAILGDVVN NGVLVEFAGC RLWWVGLFAG HAGGAFQIWN AQTEQRVFIG  300
GSLTDPETVQ GWHMLTELVE PVGRVRVTEG EFVVACTSSR LVSFNLRNPE VLIRDVGSTT  360
GFVVGSLDVS HEVFVIVERN GVGTVRRVCT FERVSRFRLR SSWLRGLLGC MNLGYVITYS  420
GSAGLLRVWD IHEPAARLCV TVGVTDEGHV HANANSMVAN RTHVAISSND SSIHLLDFSV  480
Q
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012568707.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012568707.10.0transcriptional regulator STERILE APETALA
TrEMBLA0A1S3DYY20.0A0A1S3DYY2_CICAR; transcriptional regulator STERILE APETALA
STRINGXP_004491665.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76873146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-111SAP family protein