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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_012567942.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
| Family |
GRAS |
| Protein Properties |
Length: 500aa MW: 56025.8 Da PI: 5.1127 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_012567942.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 327.5 | 2.6e-100 | 114 | 495 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalklfsevsP 89
lv+lL+++Aea++ +++ la+ +L rl+el+sp+ ++m+Rlaayft AL++ l++ ++++++ + + + + + l a++l++++sP
XP_012567942.1 114 LVHLLMAAAEALTGTNKShdLARVILIRLKELVSPTHgTNMERLAAYFTDALQTLLNG--TNCAHSTNHHKLCVLSgphQNDILYAFQLLQDMSP 206
68**********98666555************888655*******************9..4444444333333222344999************* PP
GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpeg..ppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfe 177
++kf+h+taNqaIleav +e+rvHi+D+d+++G+QW++L+q+++sR++g p+lRiT++++++ s +++etg+rL+ fA+++g pf
XP_012567942.1 207 YVKFAHFTANQAILEAVVHERRVHIVDYDVMEGAQWASLIQSFSSRKDGlpGPHLRITALSRNSGRgsgqrSIATVQETGRRLTAFATSVGQPFT 301
***********************************************662267*********7766999988999******************** PP
GRAS 178 fnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsl 271
f+ ++ e++++++L++ +gEal n+v++l +l +s ++ s ++ + k+l+Pk+v++ve+e+ +++ F+ f+++l+ ysa++dsl
XP_012567942.1 302 FHQCKLDSEETFRTSSLKLVRGEALMFNCVMHLPHLSYRSSDSIS---SFFNGAKELRPKLVTLVEEEVGPlDDAGFVGLFMDSLHRYSAMYDSL 393
***999999***************************977766666...9*******************9988*********************** PP
GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrvee.esgslvlgWkdr 365
e ++p ++ r+ vEr++lg+ i+ va + ++++ ++W e+l+++GFk v+ls+ +++qaklll ++ dgyrvee +++ lvlgWk+r
XP_012567942.1 394 EDGFPMNKWSRSLVERVFLGPLITGSVARLYITGEVEEQERSSWGEWLSASGFKGVALSYGNYCQAKLLLGLFN-DGYRVEEvDNNKLVLGWKSR 487
******************************999777788899********************************.******62699999****** PP
GRAS 366 pLvsvSaW 373
L+s+S W
XP_012567942.1 488 HLLSTSIW 495
******** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 500 aa
Download sequence Send
to blast |
MNMNMETDLD MVMDGVPNIL ELSNYSYSTT TTHTSDDEAT WNNNLSPLID LDFFTADQDH 60
FHDFIHSLTN DGITAVDSNL VNTITDQEEE ESIGYESNSN SSTEEDHDRK GLRLVHLLMA 120
AAEALTGTNK SHDLARVILI RLKELVSPTH GTNMERLAAY FTDALQTLLN GTNCAHSTNH 180
HKLCVLSGPH QNDILYAFQL LQDMSPYVKF AHFTANQAIL EAVVHERRVH IVDYDVMEGA 240
QWASLIQSFS SRKDGLPGPH LRITALSRNS GRGSGQRSIA TVQETGRRLT AFATSVGQPF 300
TFHQCKLDSE ETFRTSSLKL VRGEALMFNC VMHLPHLSYR SSDSISSFFN GAKELRPKLV 360
TLVEEEVGPL DDAGFVGLFM DSLHRYSAMY DSLEDGFPMN KWSRSLVERV FLGPLITGSV 420
ARLYITGEVE EQERSSWGEW LSASGFKGVA LSYGNYCQAK LLLGLFNDGY RVEEVDNNKL 480
VLGWKSRHLL STSIWSFMLE
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator essential for Nod-factor-induced gene expression. Acts downstream of calcium spiking and DMI3, a calcium/calmodulin-dependent protein kinase (CCaMK). {ECO:0000269|PubMed:15961668}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced 24 hours after treatment with Nod factor or Sinorhizobium meliloti. {ECO:0000269|PubMed:15961668}. |
