PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012567278.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ARR-B
Protein Properties Length: 382aa    MW: 43453.6 Da    PI: 9.424
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012567278.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.99.6e-28181234155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k+r+ Wt eLH++Fv+av+qL G +kA Pk+i+++m+v+gLt++h++SHLQk+Rl
  XP_012567278.1 181 KARVAWTVELHQQFVRAVKQL-GVDKAGPKRIMKIMNVNGLTRAHIASHLQKFRL 234
                     68*******************.********************************8 PP
2Response_reg39.62.9e-14139825109
                     EEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS
    Response_reg  25 evaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109
                     +v+++ + ++a+++l+e++  +D+ill + m +m+ ++++ + +++  k+p+i++++ g+ + + +a++ Ga d+  Kp +++++ +
  XP_012567278.1  13 SVTTCLTISDAWNILRERKgfFDVILLNVLMQDMNSYDFILHVTQQI-KIPVIMMSSDGTTSSVMRAIENGACDYWIKPLHEKQIKN 98 
                     6788888999*****999999**********************9988.9*********************************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011023.1031104IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23004.1E-2111119No hitNo description
SuperFamilySSF521723.7E-1912112IPR011006CheY-like superfamily
PfamPF000723.1E-101398IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.96E-1114104No hitNo description
PROSITE profilePS5129413.081178237IPR017930Myb domain
SuperFamilySSF466895.2E-19179238IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.9E-29179238IPR009057Homeodomain-like
TIGRFAMsTIGR015573.2E-22181234IPR006447Myb domain, plants
PfamPF002496.2E-8183232IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MPLLSCSNLL SLSVTTCLTI SDAWNILRER KGFFDVILLN VLMQDMNSYD FILHVTQQIK  60
IPVIMMSSDG TTSSVMRAIE NGACDYWIKP LHEKQIKNMW IHAARKLMNE NKKQEINRKN  120
LEFEGKKIKG EKDDLILGLI DATSEGVKID PKEGCSKVIV EKSDYVIEKD NLNENEPSTK  180
KARVAWTVEL HQQFVRAVKQ LGVDKAGPKR IMKIMNVNGL TRAHIASHLQ KFRLYLKREE  240
THKHLQQKKQ QQQNGTVKAI DSNNSNGSEG FDNHALALTN HVLNPLIEVP KHDHHQNQNS  300
SNAQLKTSTM WPNFKHESYG CNSSNQHVSS NTLLQHEYAP SSSSYGKWVP TESSNHLVDP  360
ANIRNLILMK NVTNTKPMQQ ET
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A3e-16178238262ARR10-B
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012567278.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012567278.10.0two-component response regulator ARR14-like isoform X1
TrEMBLA0A1S3DVM70.0A0A1S3DVM7_CICAR; two-component response regulator ARR14-like isoform X1
STRINGXP_004515485.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01760.13e-49response regulator 14