PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004516587.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 506aa    MW: 58118.4 Da    PI: 8.4501
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004516587.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.32e-18318368256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + k++ge
  XP_004516587.1 318 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKFRGE 368
                     59******9.**********955...5*************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.96E-34317377No hitNo description
SuperFamilySSF541711.7E-22318376IPR016177DNA-binding domain
PROSITE profilePS5103223.209318375IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.9E-32318376IPR001471AP2/ERF domain
SMARTSM003801.7E-40318381IPR001471AP2/ERF domain
PfamPF008471.0E-11319368IPR001471AP2/ERF domain
PRINTSPR003679.8E-11319330IPR001471AP2/ERF domain
PRINTSPR003679.8E-11341357IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    Send to blast
MAEYVAKFEE LARFSSHAYY IVEENLKKVQ EYKQSNWHHR YFSKFNQKLK LVTSQGKGKQ  60
VQTSNSPRAK RCSKCGKEHG GECLAGKNDG VDITWIWFKC HNNEYVVKDV YQMLVSNGEG  120
SWYPHHLVDD TVSWKRYLRT PRKYLGFTNS SLSLCRTLFL TTYTLHYFIA DNPFLWLVLM  180
DEAMNSEKST KNKEGVNETP NVIGEFETKE CDKTFFEDIS MPYTYRPLKK ICSPQNQNKN  240
QPPSSKIIFP FAFEGSSQHP ISFQHQSTTT TTTNLLPFSP PLHPTTQHII PFDHKQNTFS  300
DPNKLLRSKT QPLNATKLYR GVRQRHWGKW VAEIRLPRNR TRLWLGTFDT AEDAAMAYDR  360
EAFKFRGENA KLNFPELFLN KDKPTSSSSS TIVQISSASL PHEGSSSISC QNTNQPKLVS  420
EEHSMQILNV SETGESISKP KELVLEEMED WFNAIPAGWG PSSPLWDDLD PCLNPNKKQF  480
HVIGDETKRQ QEDNIGQGSS FNSIVP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A6e-22317375160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004516587.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027187020.10.0ethylene-responsive transcription factor ERF054
TrEMBLA0A3Q7YC060.0A0A3Q7YC06_CICAR; ethylene-responsive transcription factor ERF054
STRINGXP_004516587.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42683258
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.16e-49ERF family protein