PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004515377.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | ERF | ||||||||
Protein Properties | Length: 188aa MW: 20872.4 Da PI: 9.5329 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.9 | 7.8e-21 | 112 | 162 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 gy+GVr+++ +g+++AeIrdp+ ng +r++lg++ tae Aa a+++a+ k++g XP_004515377.1 112 GYRGVRRRP-WGKYAAEIRDPKRNG--ARVWLGTYETAENAALAYDQAAFKMRG 162 8********.**********98776..*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 1.7E-23 | 112 | 171 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 2.4E-15 | 112 | 162 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 24.276 | 112 | 170 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.9E-37 | 112 | 176 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.3E-32 | 113 | 171 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.9E-14 | 113 | 124 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 9.13E-30 | 113 | 172 | No hit | No description |
PRINTS | PR00367 | 9.9E-14 | 152 | 172 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence Send to blast |
MNTHYSSTNV NSLDQFETST TSSSTPVAPP PFTRSSSFRS LFLAESWAEL PLKEDDTDDM 60 VIYGALSEAA ATTGWCPGRN NVDVAVKIED KGKKSGITEE RVVDAPTNKK LGYRGVRRRP 120 WGKYAAEIRD PKRNGARVWL GTYETAENAA LAYDQAAFKM RGSKAKLNFP HLIDSDYISP 180 TKITRKKC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 1e-30 | 113 | 175 | 6 | 68 | ATERF1 |
3gcc_A | 1e-30 | 113 | 175 | 6 | 68 | ATERF1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional activator (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004515377.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by ethylene. {ECO:0000269|PubMed:10945353}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004515377.1 | 1e-139 | ethylene-responsive transcription factor 2-like | ||||
Swissprot | Q9LW50 | 5e-50 | ERF2_NICSY; Ethylene-responsive transcription factor 2 | ||||
TrEMBL | A0A1S2Z5D9 | 1e-137 | A0A1S2Z5D9_CICAR; ethylene-responsive transcription factor 2-like | ||||
STRING | XP_004515377.1 | 1e-138 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2239 | 33 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 1e-47 | ethylene-responsive element binding factor 13 |