PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004514952.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | ERF | ||||||||
Protein Properties | Length: 252aa MW: 27736.7 Da PI: 6.3553 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.9 | 2.6e-18 | 36 | 86 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa ++l+g XP_004514952.1 36 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 86 59*****998.**********9...336************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.14E-17 | 36 | 94 | No hit | No description |
SuperFamily | SSF54171 | 1.44E-19 | 37 | 95 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 21.562 | 37 | 94 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.3E-11 | 37 | 86 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 8.7E-30 | 37 | 95 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 9.4E-36 | 37 | 100 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.2E-9 | 38 | 49 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.2E-9 | 60 | 76 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence Send to blast |
MVKAEKKINK EKSKPMQNQP LSISSSEISA SNEKKKKYKG VRMRSWGSWV SEIRAPNQKT 60 RIWLGSYSTA EAAARAYDAA LLCLKGSSAN FNFPLNKNSS HNFIPQQNNN NNNVVMSPKS 120 IQRVAAAAAA ANNINDIAIN TPPSSNPVST TTTSSSLVSS PSMSTSSPNS DQIHDNDDVS 180 LFSSFGAYTS CDHQANESMA MMDSWYGFDG LQSPKHVNDH MLLSEALFDI DSTQVLLDDW 240 YEEGDISLWS FY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 4e-16 | 34 | 99 | 2 | 68 | ATERF1 |
3gcc_A | 4e-16 | 34 | 99 | 2 | 68 | ATERF1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004514952.1 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT146757 | 5e-63 | BT146757.1 Medicago truncatula clone JCVI-FLMt-5M3 unknown mRNA. | |||
GenBank | CR538723 | 5e-63 | CR538723.1 M.truncatula DNA sequence from clone MTH2-27D24 on chromosome 3, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027186508.1 | 0.0 | LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF014-like | ||||
TrEMBL | A0A3Q7XJ96 | 0.0 | A0A3Q7XJ96_CICAR; LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF014-like | ||||
STRING | XP_004514952.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4798 | 31 | 56 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 5e-29 | ERF family protein |