PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004514916.2
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 365aa    MW: 42023.6 Da    PI: 5.2621
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004514916.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.7e-13174225155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  XP_004514916.2 174 QRMTHIAVERNRRRQMNDHLSVLRSLMPPS---YIQRGDQASIIGGAIDFVKELE 225
                     79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000838.72E-10172222No hitNo description
PROSITE profilePS5088815.751173224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-13173228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-16173238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.7E-11174225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-10179230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MERLQGPINS CFFGEVNYLD QTLLDVENLR FEEEEQEQFL ISSLEDNMPF LQMLQSVESP  60
NFFPLKEPNF QTLLRLQQQM KKPWEDNTQV QTALEFESCV THDMLEMQYS PVKSESNELQ  120
NKISASCIEK LSYECNQKEP AKTPQTCLKS QTTREKRKRK RTRPIKNKED VENQRMTHIA  180
VERNRRRQMN DHLSVLRSLM PPSYIQRGDQ ASIIGGAIDF VKELEQLLES LEAQKRIKKN  240
DEEVSYSSSL SKPSSSTDSY GMKLSSSEEN EVKAENKSEA ADIKVTLIQT HVNLKIECKK  300
RQGQLIKVIV ALENLRLTIL HLNITSSESS VFYSLNLKIE EECKLGSAND IAEAVHEIFS  360
YINGS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174185RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004514916.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004514916.20.0transcription factor bHLH57-like
TrEMBLA0A1S2Z4G20.0A0A1S2Z4G2_CICAR; transcription factor bHLH57-like
STRINGXP_004514916.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68943449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.12e-70bHLH family protein