PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004509055.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | bZIP | ||||||||
Protein Properties | Length: 175aa MW: 20537 Da PI: 10.63 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 27.7 | 6e-09 | 74 | 119 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++ rr+++NRe+ArrsR RK+ +++L++ + eN++Lk++l+ XP_004509055.1 74 RKKRRMISNRESARRSRMRKQRHLDNLRNQLNKCRIENRELKNRLQ 119 6889**************************************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.9E-8 | 69 | 135 | No hit | No description |
SMART | SM00338 | 1.7E-10 | 70 | 134 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 1.9E-5 | 71 | 119 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.117 | 72 | 135 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.03E-10 | 74 | 121 | No hit | No description |
CDD | cd14702 | 5.84E-16 | 75 | 122 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 77 | 92 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence Send to blast |
MLSTLPPSDS LLDNSFSVFS GSFTPWDFHD MFSDAVNPTS PKPVTSSSGS EEPNPTHAKQ 60 KPDSNELNRV TDERKKRRMI SNRESARRSR MRKQRHLDNL RNQLNKCRIE NRELKNRLQF 120 ILYHSNRIRT ENEWLRSERT VLSQRINNYT QILVFQQLQP FSPAWTCNTT TVIAE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 86 | 93 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004509055.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004509055.1 | 1e-127 | basic leucine zipper 4-like | ||||
TrEMBL | A0A1S2YS51 | 1e-125 | A0A1S2YS51_CICAR; basic leucine zipper 4-like | ||||
STRING | XP_004509055.1 | 1e-126 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5435 | 32 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 6e-34 | basic leucine-zipper 5 |