PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004508802.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 229aa    MW: 25358.6 Da    PI: 8.3405
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004508802.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.56.7e-10110157455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i  ++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_004508802.1 110 SHSLAERARREKISVRMKILQDLVPGC----NKVIGKALVLDEIINYIHSLQ 157
                     8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.52E-10104161No hitNo description
SuperFamilySSF474591.7E-17104176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-17106177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.002106156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-7110157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-9112162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MEAPLVNDST FSSTNPSLSE IWPFPLHHSY YNSHFSPQQY NNNNNNECGS GTTKHIKLGS  60
SVSDDKKATS IAAQQEEKQN AKPSCDVAVP VPPKQDYIHV RARRGQATDS HSLAERARRE  120
KISVRMKILQ DLVPGCNKVI GKALVLDEII NYIHSLQHQV EFLSMKLEAL NSRFNMHPAI  180
DCFPSKEVGA QPFDLSGIIF GPQAGRGYAQ GSQPGWLHMQ IAGGFNKSM
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004508802.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311241e-120KT031124.1 Glycine max clone HN_CCL_216 bHLH transcription factor (Glyma17g10290.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004508802.11e-173transcription factor BHLH094 isoform X1
SwissprotQ69WS36e-67BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A1S2YRK71e-172A0A1S2YRK7_CICAR; transcription factor BHLH094 isoform X1
STRINGXP_004508802.11e-173(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.12e-69BIG PETAL P