PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004506390.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 306aa    MW: 35045.4 Da    PI: 6.1641
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004506390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.84.7e-121401801255
             AP2  12 rgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +gr+v+eIr p   g+++r++lg+f +ae+Aa+a++ a+  l+g
  XP_004506390.1 140 WGRYVSEIRLP---GQKTRIWLGSFESAEMAARAYDSAAYFLKG 180
                     9*********8...557**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.794114188IPR001471AP2/ERF domain
SMARTSM003803.5E-20139194IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-22139189IPR001471AP2/ERF domain
SuperFamilySSF541714.9E-15139189IPR016177DNA-binding domain
PfamPF008478.0E-6140180IPR001471AP2/ERF domain
CDDcd000181.25E-22140189No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MPQFFFPLLK ESQKFEKKRK KAIIISSVLE EESVDENAKR KSLGNHDLFT PTFSSLKIRN  60
LKAQSLDPDE VSSQWNNFLS FFTTWVQEHM EHGMHLVTQN SKNWVSTFVN NKFLFKGLNE  120
RPKALGIVSI DITKLGGLEW GRYVSEIRLP GQKTRIWLGS FESAEMAARA YDSAAYFLKG  180
SSAILNFPEE IELLPRPLSS SRRDIQSAAA KAALQRSQQQ QQLPSPSIET SNNNNNSNNN  240
NDNNNNIFSV DMMEWWKQEE CVSTMSFWDV KDDPLMSPPR MGSTFGDLTW NEVFNFNDDI  300
LTKAQP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-131401932377Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11620KKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004506390.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGXP_004506390.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF137561621
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25820.16e-24ERF family protein