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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_004504565.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
|
| Family |
GRAS |
| Protein Properties |
Length: 537aa MW: 59189.5 Da PI: 5.6804 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_004504565.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 458.4 | 4.4e-140 | 171 | 527 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
lv++L++cAeav++++l+ a+al++++ la ++ +m+++a+yf+e+La+r+++ + s +s++l++ f+e++P+lkf+h
XP_004504565.1 171 LVHTLMACAEAVEQSNLTVAEALVKQIGYLAVSQEGAMRKVATYFAEGLARRIYG---------VFPQHS---VSDSLQI--HFYETCPYLKFAH 251
689****************************************************.........223333...5666555..4************ PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
+taNqaIlea++g++rvH+iDf+i+qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+s++++ l+++g++La+fA++++v+fe++ +va++l+dl+
XP_004504565.1 252 FTANQAILEAFQGKSRVHVIDFSINQGMQWPALMQALALRPGGPPAFRLTGIGPPASDNSDHLQQVGWKLAQFAQTIHVQFEYRGFVANSLADLD 346
*********************************************************************************************** PP
GRAS 191 leeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
++L++++ E++aVn+v++lh+l +++++le+ v +++++++P++v+vveqea+hn++ Fl+rf+e+l+yys+lfdsle + + +++++
XP_004504565.1 347 ASMLELRSpkTESVAVNSVFELHKLNARPGALEK----VFSVIRQIRPEIVTVVEQEANHNGPAFLDRFTESLHYYSTLFDSLEGS--SVEQQEK 435
*****99999************************....*********************************************888..5678999 PP
GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
+++++lg++i+nvvaceg++r+erhetl++Wr+r+++aGF+pv+l+++a kqa++ll+ ++ +dgy+vee++g+l+lgW++rpL+++SaW+
XP_004504565.1 436 AMSEMYLGKQICNVVACEGTDRVERHETLNQWRNRFGSAGFSPVHLGSNAFKQASMLLALFAgGDGYKVEENDGCLMLGWHTRPLIATSAWK 527
9999***************************************************************************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006808 | Biological Process | regulation of nitrogen utilization |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009863 | Biological Process | salicylic acid mediated signaling pathway |
| GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0010218 | Biological Process | response to far red light |
| GO:0010233 | Biological Process | phloem transport |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:2000033 | Biological Process | regulation of seed dormancy process |
| GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| Sequence ? help Back to Top |
| Protein Sequence Length: 537 aa
Download sequence Send
to blast |
MKREHKHENE DMSGSGSGKS GVCWEDDGGM DELLAVVGYK VKSSDMAEVA QKLEQLEHAM 60
GNFQDQDEAI IAQQLSNDTV HYNPSDISNW LKTMLSNFDP QPQNPSVSSS SDNDLNAIPG 120
KAIYATTTTT TTTTTDSDES LPSSKRLKRT STDSTRSVVM VVETQEKGIR LVHTLMACAE 180
AVEQSNLTVA EALVKQIGYL AVSQEGAMRK VATYFAEGLA RRIYGVFPQH SVSDSLQIHF 240
YETCPYLKFA HFTANQAILE AFQGKSRVHV IDFSINQGMQ WPALMQALAL RPGGPPAFRL 300
TGIGPPASDN SDHLQQVGWK LAQFAQTIHV QFEYRGFVAN SLADLDASML ELRSPKTESV 360
AVNSVFELHK LNARPGALEK VFSVIRQIRP EIVTVVEQEA NHNGPAFLDR FTESLHYYST 420
LFDSLEGSSV EQQEKAMSEM YLGKQICNVV ACEGTDRVER HETLNQWRNR FGSAGFSPVH 480
LGSNAFKQAS MLLALFAGGD GYKVEENDGC LMLGWHTRPL IATSAWKLAA NSVVVSH
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway. |
