PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004504077.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family CAMTA
Protein Properties Length: 1102aa    MW: 126021 Da    PI: 5.823
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004504077.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1180.61.9e-56191353118
            CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 
                     +e ++rwl+++ei++iL+n++++++++++ + p+sgs++L++rk++ryfrkDG++w+kkkdgktvrE+he+LK g+v+vl+cyYah+e+n++fqr
  XP_004504077.1  19 SEaQHRWLRSTEICQILTNYNSFQIASQPSHMPPSGSVFLFDRKVMRYFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGEQNENFQR 113
                     4449******************************************************************************************* PP

            CG-1  97 rcywlLeeelekivlvhylevk 118
                     r+yw+Leeel++ivlvhy++vk
  XP_004504077.1 114 RTYWMLEEELSHIVLVHYRQVK 135
                     *******************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143778.85114140IPR005559CG-1 DNA-binding domain
SMARTSM010765.2E-7617135IPR005559CG-1 DNA-binding domain
PfamPF038591.0E-4920133IPR005559CG-1 DNA-binding domain
SuperFamilySSF812963.11E-16513598IPR014756Immunoglobulin E-set
PfamPF018336.2E-6513593IPR002909IPT domain
Gene3DG3DSA:1.25.40.205.4E-19700815IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029718.404703824IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484031.18E-18709816IPR020683Ankyrin repeat-containing domain
CDDcd002047.44E-14709812No hitNo description
PfamPF127964.0E-8725815IPR020683Ankyrin repeat-containing domain
PROSITE profilePS500889.324753785IPR002110Ankyrin repeat
SMARTSM002480.029753782IPR002110Ankyrin repeat
SMARTSM00248130792821IPR002110Ankyrin repeat
SuperFamilySSF525407.17E-7920975IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM0001534925947IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.888927955IPR000048IQ motif, EF-hand binding site
PfamPF006120.22929946IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0032948970IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.901949973IPR000048IQ motif, EF-hand binding site
PfamPF006121.3E-4950969IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0010150Biological Processleaf senescence
GO:0042742Biological Processdefense response to bacterium
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005516Molecular Functioncalmodulin binding
Sequence ? help Back to Top
Protein Sequence    Length: 1102 aa     Download sequence    Send to blast
MAHNHLHPNQ FDTIEQILSE AQHRWLRSTE ICQILTNYNS FQIASQPSHM PPSGSVFLFD  60
RKVMRYFRKD GHNWRKKKDG KTVREAHERL KAGSVDVLHC YYAHGEQNEN FQRRTYWMLE  120
EELSHIVLVH YRQVKGVTKA NFICGKENEE YHPYAQQTDK VMPNTKMETF LSSSLNPLSY  180
QLQSQTMDTS INSFQASEYE EAESAFNSHE NSDLYSFLEL QHPFVHKIKA QLADSNSPLP  240
LKDDQERLPV IPQVDYISLS QANETKYINN ARLTCESSKL LGFSSWEDIL ENNAGCHNVI  300
SQPSFPETQH NNMNLNSTYQ GYDIMGQHFT ISITKQHENG SLIQAEGNWQ ASHFNSLSSS  360
NWPEDSACSG STCEVGYSDC EQEVNEVDLQ QSLEQFLLHP HQQHEVLMQN SPREILLNEE  420
DKLESELEVD RSIDGIEDTH FTSKKTLLDV SVAEEGLKKL DSFNQWMSKE LGDVEESSNR  480
STSSTYWDTV ESENEVGNYV LDPSISHDQL FSIIDYSPSW TFEYSEIKVL ISGRFLKSQH  540
EAEDCKWSCM FGEVEVPAEV IGNGVLCCHT PPHKAGRVPF YVTCSNRLAC SELREFDFCV  600
NYTQEVYTAG ENRSSITFDS FNKRFGDLLS LEHDFNHSLD SISVSEKSNE KYQLRSKISS  660
LLRREDDEWD KLLKFTLEKD FSPELVQEQL LEDLLKDKLH SWLLQKTTED GKGPNVLDES  720
GQGVLHFAAA LGYGWALEPT IIAGVNVNFR DVNGWTALHW AAVCGRERTV ASLISLGAAP  780
GALTDPCPKH PSGRTPADLA SENGHKGIAA YLAEYFLSAQ LKSLDLKRDL GENFGEKIIQ  840
RIQEQNTAKE VLSHELSLKD SLAAVCNATQ AAARIHQVFR VQSFQRKQKQ QKEYGDYKFG  900
VSDERALSLI TINAKSHKFG QCYEPVHIAA TRIQNKFRSW KGRKDFLIIR RRIVKIQAHV  960
RGHQVRKNYG KIVWSVGIME KVILRWRRKG SGLRGFKSEA ISDGTMVLGV SSSTEDDYDF  1020
LKEGRKQTEK RLEKALARVK SMAQYPDARD QYHRLLNVVT EIQENQVKQD WNFNNSEETR  1080
HVDNLVDLES LLNEDTFMPV DT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4hb5_A1e-1170984525158Engineered Protein
4hb5_B1e-1170984525158Engineered Protein
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00042PBMTransfer from AT2G22300Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004504077.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004504077.10.0calmodulin-binding transcription activator 1
TrEMBLA0A1S2YFK30.0A0A1S2YFK3_CICAR; calmodulin-binding transcription activator 1
STRINGXP_004504077.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF82842735
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.20.0signal responsive 1