PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004503788.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 334aa    MW: 37756.4 Da    PI: 8.4523
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004503788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.4e-10163210455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k + Ka +L + ++Y++sLq
  XP_004503788.1 163 SHSLAERVRREKISDRMKILQQLVPGC----DKVNGKALVLDEIINYVQSLQ 210
                     8*************************9....5559****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.83E-15157218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.26E-10157214No hitNo description
PROSITE profilePS5088815.428159209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-15159217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.1E-7163210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-9165215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MAAFPYQYQQ QPFIVDSAYF TNINISSIDQ PLHIINTSLP FLSVINHETS CLHQNSNNSL  60
SDHNNPSPQS SMVVDKLEKG EQVTQKVSSM ENKKRIRNKS SLSSPLSKDS IEGRSKKQKK  120
SSGEGMKRED KKKEEKKDQK KILEEPPTGY IHVRARRGQA TDSHSLAERV RREKISDRMK  180
ILQQLVPGCD KVNGKALVLD EIINYVQSLQ NQVEVMFLSM KLASVNPIFF DLAIDLDHQS  240
LNSITSQPSP STTPLPSLPL SNSNHATPFA DTITTTFHHV NNDYLLEYPN PMFLQGQRSN  300
TIFEQNGGPF WDAEEQRQKH LNPYGFGNNT CSLN
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004503788.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004503788.10.0transcription factor bHLH137-like isoform X6
TrEMBLA0A1S2YEW10.0A0A1S2YEW1_CICAR; transcription factor bHLH137-like isoform X6
STRINGXP_004503788.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41823358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.24e-50bHLH family protein